RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 CNPY1Q3B7I2 92 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ALG10BQ5I7T1 473 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 PDZK1Q5T2W1 519 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CCNJQ5T5M9 372 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZNF367Q7RTV3 350 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 RBM45Q8IUH3 476 aaKnown RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 CLVS1Q8IUQ0 354 aaPredicted RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 GID4Q8IVV7 300 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 METTL27Q8N6F8 245 aaPredicted RBP7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZNF614Q8N883 585 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 OR4D11Q8NGI4 311 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 OR13F1Q8NGS4 319 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 SLC22A8Q8TCC7 542 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZNF721Q8TF20 911 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CA5BP1Q8WTZ4 195 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 TMEM234Q8WY98 164 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MUL1Q969V5 352 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ZG16BQ96DA0 208 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 TMEM43Q9BTV4 400 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CDCA4Q9BXL8 241 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ITPAQ9BY32 194 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 TBL1XR1Q9BZK7 514 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 LAT2Q9GZY6 243 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 FN3KQ9H479 309 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 RASSF1Q9NS23 344 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 MAN2C1Q9NTJ4 1040 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 TBC1D23Q9NUY8 699 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 RLIMQ9NVW2 624 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 SEC14L4Q9UDX3 406 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 KCNN3Q9UGI6 736 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 SLC7A7Q9UM01 511 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 ERGIC3Q9Y282 383 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CLDN16Q9Y5I7 305 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 CEPT1Q9Y6K0 416 aa7.6□□□□□ -1.19
CHD4-208ENST00000540960 A0A0B4J2E0 115 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 A0A1B0GX12 115 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 SAGE2PA6NJ88 616 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 RIIAD1A6NNX1 92 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 IDSB3KWA1 339 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 ALG1L2C9J202 215 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 FAM47E-STBD1D6RA91 191 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 PEX12O00623 359 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 CDK2AP1O14519 115 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 SLC22A1O15245 554 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 PRODHO43272 600 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 FADS2O95864 444 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 EPPINO95925 133 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 MYL12AP19105 171 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 CCNA2P20248 432 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 SLC6A6P31641 620 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 PTGER1P34995 402 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 OMPP47874 163 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 RFX3P48380 749 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 CDH15P55291 814 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 SOX8P57073 446 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 PRPS1P60891 318 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 TFF3Q07654 80 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 LGALS3BPQ08380 585 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 RAB40BQ12829 278 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 POU4F2Q12837 409 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 RAB39AQ14964 217 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 EBPQ15125 230 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 NEDD8Q15843 81 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 KRTAP24-1Q3LI83 254 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 SYT6Q5T7P8 510 aaPredicted RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 C1orf189Q5VU69 101 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 UBE2UQ5VVX9 321 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 PLAG1Q6DJT9 500 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 RPUSD3Q6P087 351 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 FAM198BQ6UWH4 519 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 C3P1Q6ZMU1 363 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 CPEB2Q7Z5Q1 589 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 WDR53Q7Z5U6 358 aaPredicted RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 EGFL6Q8IUX8 553 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 LACC1Q8IV20 430 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 NRMQ8IXM6 262 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 CNIH3Q8TBE1 160 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 TMEM163Q8TC26 289 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 RNF217Q8TC41 542 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 ZFAND2BQ8WV99 257 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 ADIPOR1Q96A54 375 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 BPIFA2Q96DR5 249 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 TMEM80Q96HE8 168 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 DOK1Q99704 481 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 CRB3Q9BUF7 120 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 PLA2G12AQ9BZM1 189 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 WWTR1Q9GZV5 400 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 QRSL1Q9H0R6 528 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 RBM38Q9H0Z9 239 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 ANKRA2Q9H9E1 313 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 MRPS18AQ9NVS2 196 aaKnown RBP7.59□□□□□ -1.19
CHD4-208ENST00000540960 FKBP14Q9NWM8 211 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 SLC6A5Q9Y345 797 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 MGAM2Q2M2H8 2515 aa7.59□□□□□ -1.19
CHD4-208ENST00000540960 A0A087WUJ7 227 aa7.58□□□□□ -1.2
CHD4-208ENST00000540960 A0A1B0GWA3 101 aa7.58□□□□□ -1.2
CHD4-208ENST00000540960 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
CHD4-208ENST00000540960 TGFBR3LH3BV60 316 aa7.58□□□□□ -1.2
CHD4-208ENST00000540960 TP53I11O14683 189 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms