RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 LOXL2Q9Y4K0 774 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 MED13LQ71F56 2210 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 BOLA2-SMG1P6H3BVE0 249 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 M0R082 166 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 SMIM18P0DKX4 95 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 ITGAMP11215 1152 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 ILKQ13418 452 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 P2RY14Q15391 338 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 TMEM71Q6P5X7 295 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 OR1J4Q8NGS1 313 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 OR13C3Q8NGS6 347 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 OR5AK2Q8NH90 309 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 ZNF417Q8TAU3 575 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 TRUB1Q8WWH5 349 aaKnown RBP8.78□□□□□ -1
TTC39C-203ENST00000540918 ZNF587Q96SQ5 575 aaPredicted RBP8.78□□□□□ -1
TTC39C-203ENST00000540918 MICU1Q9BPX6 476 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 FUZQ9BT04 418 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 VN1R1Q9GZP7 353 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 ZMAT3Q9HA38 289 aaKnown RBP8.78□□□□□ -1
TTC39C-203ENST00000540918 ELOVL3Q9HB03 270 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 C20orf141Q9NUB4 165 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 PLA2G3Q9NZ20 509 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 HSPE1-MOB4S4R3N1 261 aa8.78□□□□□ -1
TTC39C-203ENST00000540918 COL4A6Q14031 1691 aa8.77□□□□□ -1
TTC39C-203ENST00000540918 PDCD5O14737 125 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 EDN3P14138 238 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 DLSTP36957 453 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 GLO1Q04760 184 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 GAB4Q2WGN9 574 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 LRRC37A5PQ49AS3 106 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 OPN5Q6U736 354 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 CCDC80Q76M96 950 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 HDDC2Q7Z4H3 204 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 PEG10Q86TG7 708 aaKnown RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF845Q96IR2 970 aaPredicted RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SEMA4CQ9C0C4 833 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 TWSG1Q9GZX9 223 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 KLHL9Q9P2J3 617 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 PSORS1C1Q9UIG5 152 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 CDH23Q9H251 3354 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 XIRP2A4UGR9 3374 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF593O00488 134 aaPredicted RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 HIST1H1CP16403 213 aaKnown RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 RAB3BP20337 219 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SLC2A5P22732 501 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SHC1P29353 583 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SLC1A3P43003 542 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 TSFMP43897 325 aaKnown RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF84P51523 738 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SSR4P51571 173 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 GABARAPL2P60520 117 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 PDSS1Q5T2R2 415 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SLC18B1Q6NT16 456 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ABHD12BQ7Z5M8 362 aaPredicted RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 S100A16Q96FQ6 103 aaKnown RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 GNRHR2Q96P88 292 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 INTS14Q96SY0 518 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 MFRPQ9BY79 579 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ABCG5Q9H222 651 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 MMP27Q9H306 513 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 CALHM2Q9HA72 323 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF701Q9NV72 531 aaPredicted RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 GPATCH2Q9NW75 528 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 DOCK9Q9BZ29 2069 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 INTS1Q8N201 2190 aaKnown RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 A6NLC8 198 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SLITRK5O94991 958 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 CYB5AP00167 134 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 LIPCP11150 499 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ARHGAP11BQ3KRB8 267 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 SYT14P1Q58G82 188 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 TMEM69Q5SWH9 247 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 FOXB2Q5VYV0 432 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ALDH16A1Q8IZ83 802 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 DEFB124Q8NES8 71 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 GHSRQ92847 366 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 RFT1Q96AA3 541 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 CLEC4MQ9H2X3 399 aaPredicted RBP8.77□□□□□ -1.01
TTC39C-203ENST00000540918 BABAM2Q9NXR7 383 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 COMMD9Q9P000 198 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 ENPP5Q9UJA9 477 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 FBXL4Q9UKA2 621 aa8.77□□□□□ -1.01
TTC39C-203ENST00000540918 TRPM7Q96QT4 1865 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 ZFC3H1O60293 1989 aaKnown RBP8.76□□□□□ -1.01
TTC39C-203ENST00000540918 CENPVL1A0A0U1RR11 272 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 CDHR4A6H8M9 788 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 LRRTM2O43300 516 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 HPGDSO60760 199 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 ABOP16442 354 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 SLC6A8P48029 635 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 ACTC1P68032 377 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 ACTA1P68133 377 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 PLP2Q04941 152 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 NKPD1Q17RQ9 610 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 PRSS53Q2L4Q9 553 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 SLC22A10Q63ZE4 541 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 ZNF425Q6IV72 752 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 SLC25A24Q6NUK1 477 aa8.76□□□□□ -1.01
TTC39C-203ENST00000540918 GPALPP1Q8IXQ4 340 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms