RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 C1orf52Q8N6N3 182 aaKnown RBP3.96□□□□□ -1.78
SNHG1-214ENST00000540865 GATSQ8NAP1 163 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 ATP6V1C2Q8NEY4 427 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 NUP37Q8NFH4 326 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 OR4M2Q8NGB6 313 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 OR4F15Q8NGB8 312 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 FBXO30Q8TB52 745 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 HOXB13Q92826 284 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-214ENST00000540865 ATP6V1E2Q96A05 226 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 EXOSC8Q96B26 276 aaKnown RBP3.96□□□□□ -1.78
SNHG1-214ENST00000540865 LRRC58Q96CX6 371 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 SH3YL1Q96HL8 342 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-214ENST00000540865 SLC38A2Q96QD8 506 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 BBS4Q96RK4 519 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 KCNS3Q9BQ31 491 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 KLHDC3Q9BQ90 382 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 ELOVL6Q9H5J4 265 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF442Q9H7R0 627 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 NOL11Q9H8H0 719 aaKnown RBP3.96□□□□□ -1.78
SNHG1-214ENST00000540865 ANKZF1Q9H8Y5 726 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 OBP2BQ9NPH6 170 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 UBQLN4Q9NRR5 601 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 DDX18Q9NVP1 670 aaKnown RBP3.96□□□□□ -1.78
SNHG1-214ENST00000540865 TXNDC16Q9P2K2 825 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 VPS29Q9UBQ0 182 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 SLC12A4Q9UP95 1085 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 PPIAL4AQ9Y536 164 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 MMP24Q9Y5R2 645 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.78
SNHG1-214ENST00000540865 A0A1B0GUS0 222 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 TMEM129A0AVI4 362 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 DNAJC9-AS1A6NH13 148 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ZNF716A6NP11 495 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 LYNX1G3V0Z9 82 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CLDN34H7C241 214 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 M0QZ24 198 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SCAMP2O15127 329 aaKnown RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 HOXA3O43365 443 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 MRPL33O75394 65 aaKnown RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 NKX2-2O95096 273 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 HSPA4LO95757 839 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 PDYNP01213 254 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 IGFBP1P08833 259 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 LYNX1P0DP58 116 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 GYPEP15421 78 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 NPR2P20594 1047 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ACHEP22303 614 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 GATA3P23771 443 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 MPGP29372 298 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ECHS1P30084 290 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ARL1P40616 181 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 MAP3K8P41279 467 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 GSTM5P46439 218 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SLC6A9P48067 706 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 P2RX1P51575 399 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CCNG1P51959 295 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 NCBP2P52298 156 aaKnown RBP eCLIP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SLC16A1P53985 500 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 FOXG1P55316 489 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ARL4CP56559 192 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CSNK2A1P68400 391 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 MRPS11P82912 194 aaKnown RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 TRAF3Q13114 568 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CD226Q15762 336 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 C3orf36Q3SXR2 165 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SGO1Q5FBB7 561 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ELFN2Q5R3F8 820 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SAXO2Q658L1 398 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 REP15Q6BDI9 236 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ACSM5Q6NUN0 579 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 C3orf33Q6P1S2 294 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ANKRD16Q6P6B7 361 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 KLHL24Q6TFL4 600 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 TMEM107Q6UX40 140 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 TMPPEQ6ZT21 453 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 RAPH1Q70E73 1250 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CCDC91Q7Z6B0 441 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ZCCHC24Q8N2G6 241 aaKnown RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 PQLC1Q8N2U9 271 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 RIBC1Q8N443 379 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SIGLECL1Q8N7X8 197 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 FBXO36Q8NEA4 188 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 OR52E4Q8NGH9 312 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 OR6Y1Q8NGX8 325 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CEP70Q8NHQ1 597 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 GPR151Q8TDV0 419 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SELENOMQ8WWX9 145 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 PIK3R3Q92569 461 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CDKL2Q92772 493 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 RDH5Q92781 318 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 DVL3Q92997 716 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-214ENST00000540865 SLC25A28Q96A46 364 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ELP4Q96EB1 424 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 ANKRD27Q96NW4 1050 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 OR5B2Q96R09 309 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CCT8L2Q96SF2 557 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 RBBP8Q99708 897 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 GPA33Q99795 319 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 CPNE1Q99829 537 aa3.95□□□□□ -1.78
SNHG1-214ENST00000540865 RSPO3Q9BXY4 272 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms