RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 TMCO6Q96DC7 493 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 KLHDC3Q9BQ90 382 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 KCNN2Q9H2S1 579 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 SLC22A11Q9NSA0 550 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 U3KQA8 63 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 EXPH5Q8NEV8 1989 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 IGLV3-12A0A075B6K2 115 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CCDC163A0A0D9SF12 145 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ANKRD34CP0C6C1 535 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 OR2T7P0C7T2 308 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 HPGDP15428 266 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 UQCRC1P31930 480 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 SLC6A8P48029 635 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 DIO1P49895 249 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CAV3P56539 151 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 IL10RAQ13651 578 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 TMEM71Q6P5X7 295 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
RTN3-210ENST00000540798 FAM122BQ7Z309 247 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 PXKQ7Z7A4 578 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 UBALD2Q8IYN6 164 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 FAM98AQ8NCA5 519 aaKnown RBP12.57□□□□□ -0.4
RTN3-210ENST00000540798 OR2T27Q8NH04 317 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 CAPSLQ8WWF8 208 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 C4orf36Q96KX1 117 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ADOQ96SZ5 270 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 SLC6A5Q9Y345 797 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 PCDHGB2Q9Y5G2 931 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 MPDZO75970 2070 aa12.57□□□□□ -0.4
RTN3-210ENST00000540798 EPHA8P29322 1005 aaPredicted RBP12.56□□□□□ -0.4
RTN3-210ENST00000540798 ARRB1P49407 418 aaPredicted RBP12.56□□□□□ -0.4
RTN3-210ENST00000540798 SLC16A1P53985 500 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 E2F1Q01094 437 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 ZNF117Q03924 483 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 NSDHLQ15738 373 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 LCN1P1Q5VSP4 162 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 DESI1Q6ICB0 168 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 SYS1Q8N2H4 156 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 RFLNBQ8N5W9 214 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 GDPD1Q8N9F7 314 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 ZNRF4Q8WWF5 429 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 CNN2Q99439 309 aaKnown RBP12.56□□□□□ -0.4
RTN3-210ENST00000540798 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 ALG1L2C9J202 215 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 IMPA2O14732 288 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 TXNDC12O95881 172 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 IL7P13232 177 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 F8A1P23610 371 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 OR12D2P58182 307 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 LTBQ06643 244 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 CDONQ4KMG0 1287 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 RHBDD2Q6NTF9 364 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 NR2C2APQ86WQ0 139 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 EXD3Q8N9H8 876 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 MOSPD2Q8NHP6 518 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 DPYSL5Q9BPU6 564 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 SYNDIG1Q9H7V2 258 aa12.56□□□□□ -0.4
RTN3-210ENST00000540798 OR6C68A6NDL8 312 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 OGG1O15527 345 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 EIF4E2O60573 245 aaKnown RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 CD1AP06126 327 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 PTBP1P26599 531 aaKnown RBP eCLIP12.55□□□□□ -0.45e-7■■■■□ 22.4
RTN3-210ENST00000540798 RP1P56715 2156 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 RIN1Q13671 783 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 C1orf189Q5VU69 101 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 METAP1DQ6UB28 335 aaPredicted RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 PRR22Q8IZ63 422 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 TEX19Q8NA77 164 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 OR5J2Q8NH18 312 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 ZPLD1Q8TCW7 415 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 SMAP2Q8WU79 429 aaPredicted RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 TXNDC15Q96J42 360 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 MOGAT1Q96PD6 335 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 PPIL3Q9H2H8 161 aaKnown RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 SRPK3Q9UPE1 567 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 UNC13CQ8NB66 2214 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 SMIM30A4D0T7 59 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 ADAM10O14672 748 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 DLGAP3O95886 979 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 SPI1P17947 270 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 RPL4P36578 427 aaKnown RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 GXYLT1Q4G148 440 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 CCBE1Q6UXH8 406 aaPredicted RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 ZMYND19Q96E35 227 aaPredicted RBP12.55□□□□□ -0.4
RTN3-210ENST00000540798 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 FABP12A6NFH5 140 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 NCR1O76036 304 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 ENPP1P22413 925 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 GRK6P43250 576 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 SLC25A1P53007 311 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 NRG3P56975 720 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 ACTA2P62736 377 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 ACTG2P63267 376 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 LGALS3BPQ08380 585 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 LINC01590Q5TEZ4 76 aa12.55□□□□□ -0.4
RTN3-210ENST00000540798 LYSMD4Q5XG99 296 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms