RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 OR6S1Q8NH40 331 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 RNF128Q8TEB7 428 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 TMEM239Q8WW34 195 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 GMPPAQ96IJ6 420 aaPredicted RBP13.84□□□□□ -0.19
DDB1-218ENST00000540784 PTDSS2Q9BVG9 487 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 SLC19A3Q9BZV2 496 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 MAGIXQ9H6Y5 334 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 NMNAT1Q9HAN9 279 aaPredicted RBP13.84□□□□□ -0.19
DDB1-218ENST00000540784 KLHL9Q9P2J3 617 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 SLC7A8Q9UHI5 535 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 CLEC4AQ9UMR7 237 aa13.84□□□□□ -0.19
DDB1-218ENST00000540784 A0A1W2PNV4 684 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 CLDN14O95500 239 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 SEMG1P04279 462 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 YES1P07947 543 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 RNF224P0DH78 156 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 KLK2P20151 261 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 PTNP21246 168 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 BMP5P22003 454 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 SMIM11AP58511 58 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 MFSD13AQ14CX5 517 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 OTUD3Q5T2D3 398 aaPredicted RBP13.83□□□□□ -0.2
DDB1-218ENST00000540784 TMEM225Q6GV28 225 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 FAM214BQ7L5A3 538 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 SPATA24Q86W54 205 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 ZDHHC21Q8IVQ6 265 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 OFCC1Q8IZS5 231 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 TMEM99Q8N816 258 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 PIK3C3Q8NEB9 887 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 PIGXQ8TBF5 258 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 ABHD3Q8WU67 409 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 ZNF347Q96SE7 839 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 PIP5K1AQ99755 562 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 ZNF426Q9BUY5 554 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 SFXN3Q9BWM7 321 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 KLHL4Q9C0H6 718 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 GP6Q9HCN6 339 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 EMC9Q9Y3B6 208 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 MED31Q9Y3C7 131 aa13.83□□□□□ -0.2
DDB1-218ENST00000540784 FTCDNL1E5RQL4 147 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 KPNA4O00629 521 aaPredicted RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 SS18L1O75177 396 aaPredicted RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 DIRAS1O95057 198 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 PRSS23O95084 383 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 MT-ND1P03886 318 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 H1F0P07305 194 aaKnown RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 UMPSP11172 480 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 CBLP22681 906 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 KIR2DL2P43627 348 aaPredicted RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 SIRPAP78324 504 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 GABPB1Q06547 395 aaPredicted RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 LTBQ06643 244 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 PDK3Q15120 406 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 IQCCQ4KMZ1 466 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 TMEM201Q5SNT2 666 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 H1FNTQ75WM6 255 aaPredicted RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 RRM2BQ7LG56 351 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 PIWIL3Q7Z3Z3 882 aaKnown RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 TUSC5Q8IXB3 177 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 TMEM255BQ8WV15 326 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 TACO1Q9BSH4 297 aaKnown RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 ASPNQ9BXN1 380 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 UCK2Q9BZX2 261 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 ANKRD19PQ9H560 264 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 C6orf203Q9P0P8 240 aaPredicted RBP13.82□□□□□ -0.2
DDB1-218ENST00000540784 KLHL13Q9P2N7 655 aa13.82□□□□□ -0.2
DDB1-218ENST00000540784 PHF3Q92576 2039 aaKnown RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 HELZ2Q9BYK8 2649 aaKnown RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 HTR3EA5X5Y0 456 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 AQP7P3A6NL99 342 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 CIB2O75838 187 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 TNFSF13O75888 250 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 VAMP5O95183 116 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 CH25HO95992 272 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 MT-ATP6P00846 226 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 BGLAPP02818 100 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 HIST1H2ABP04908 130 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 FUT4P22083 530 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 GRPRP30550 384 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 CDSNQ15517 529 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 SLC25A35Q3KQZ1 300 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 ZNF730Q6ZMV8 503 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 HIST3H2AQ7L7L0 130 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 MAMDC2Q7Z304 686 aaPredicted RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 BTLAQ7Z6A9 289 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 RNF113BQ8IZP6 322 aaKnown RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 ACOT11Q8WXI4 607 aaPredicted RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 HIST1H2ACQ93077 130 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 ZNF775Q96BV0 537 aaPredicted RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 STARD4Q96DR4 205 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 MOGAT1Q96PD6 335 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 PSD2Q9BQI7 771 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 PIGMQ9H3S5 423 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 BCO1Q9HAY6 547 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 MEPEQ9NQ76 525 aaPredicted RBP13.81□□□□□ -0.2
DDB1-218ENST00000540784 MAN2C1Q9NTJ4 1040 aa13.81□□□□□ -0.2
DDB1-218ENST00000540784 AURKCQ9UQB9 309 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms