RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 OR9A2Q8NGT5 310 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 IRF7Q92985 503 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 SLC22A18Q96BI1 424 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 CMTM7Q96FZ5 175 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 TGM7Q96PF1 710 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 NRIP2Q9BQI9 281 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 MGME1Q9BQP7 344 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 OPN3Q9H1Y3 402 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 MEPEQ9NQ76 525 aaPredicted RBP8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 GPATCH2Q9NW75 528 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 WWOXQ9NZC7 414 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 ASF1AQ9Y294 204 aa8.75□□□□□ -1.01
CTNNA1-243ENST00000540387 C2orf16Q68DN1 1984 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 TSTD3H0UI37 97 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SYT5O00445 386 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 BCL2L11O43521 198 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 FADS1O60427 444 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 HOXB5P09067 269 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 C1GALT1C1LP0DN25 315 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 EPB42P16452 691 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 HOXA5P20719 270 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 S100A2P29034 98 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 CRABP1P29762 137 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PDHA2P29803 388 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 DGKGP49619 791 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 OR2B8PP59922 312 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 LSM6P62312 80 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SERINC3Q13530 473 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 TRAM1Q15629 374 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 INPP5JQ15735 1006 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 AARDQ4LEZ3 155 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 ARMC12Q5T9G4 340 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 AADACL4Q5VUY2 407 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 RNF219Q5W0B1 726 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 LIN54Q6MZP7 749 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 NPSR1Q6W5P4 371 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SLC36A4Q6YBV0 504 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF852Q6ZMS4 543 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 DPPA4Q7L190 304 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 LINGO2Q7L985 606 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PIANPQ8IYJ0 282 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SMRP1Q8NCR6 262 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 OR1J4Q8NGS1 313 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 OR52I2Q8NH67 350 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PAQR8Q8TEZ7 354 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 C3orf49Q96BT1 292 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF649Q9BS31 505 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 FBXW2Q9UKT8 454 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 MOKQ9UQ07 419 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SIRT4Q9Y6E7 314 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 hCG_1809904A0A1W2PP81 198 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 A0A1W2PR64 198 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 A0A1W2PRV1 198 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PYCARD-AS1I3L0S3 204 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 BCAT2O15382 392 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 FGF16O43320 207 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 EMC8O43402 210 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 FMO6PO60774 539 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 NDUFB6O95139 128 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 LAMP2P13473 410 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 RNH1P13489 461 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 AMD1P17707 334 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 RAB5AP20339 215 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 FCARP24071 287 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 ACKR3P25106 362 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PLA2G7Q13093 441 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 ALG11Q2TAA5 492 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 MARC1Q5VT66 337 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PSAPL1Q6NUJ1 521 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 KIAA1211LQ6NV74 962 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 C11orf88Q6PI97 169 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SLC36A1Q7Z2H8 476 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 OR2G2Q8NGZ5 317 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 ARRDC2Q8TBH0 407 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 CDX2Q99626 313 aaPredicted RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 RPP25Q9BUL9 199 aaKnown RBP8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PLA2G2FQ9BZM2 168 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 MAGEH1Q9H213 219 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 PLEKHA1Q9HB21 404 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 SPHK2Q9NRA0 654 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 FAM96BQ9Y3D0 163 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 MAP4K5Q9Y4K4 846 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 MMACHCQ9Y4U1 282 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 DOCK4Q8N1I0 1966 aa8.74□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM272A0A1B0GTI8 110 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 PSMD9O00233 223 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FAAHO00519 579 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CLDN9O95484 217 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 MNDAP41218 407 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 CDX1P47902 265 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 SLC6A11P48066 632 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 AP3S2P59780 193 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 NHLH2Q02577 135 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 TNFRSF9Q07011 255 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 FZD5Q13467 585 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 BEX5Q5H9J7 111 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 KRBOX4Q5JUW0 171 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 THEM4Q5T1C6 240 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 ADNP2Q6IQ32 1131 aa8.73□□□□□ -1.01
CTNNA1-243ENST00000540387 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms