RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 USE1Q9NZ43 259 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KIF17Q9P2E2 1029 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 A0A1B0GVC2 190 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FTCDNL1E5RQL4 147 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SEC14L5O43304 696 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MITFO75030 526 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ACTL6AO96019 429 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FPR3P25089 353 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 IDUAP35475 653 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ALDH3A2P51648 485 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SUCLG1P53597 346 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CLDN15P56746 228 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 HSF1Q00613 529 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TSPAN31Q12999 210 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CTU2Q2VPK5 515 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 UBQLNLQ8IYU4 475 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 C10orf53Q8N6V4 93 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR6S1Q8NH40 331 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SLC25A36Q96CQ1 311 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SNRNP40Q96DI7 357 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 HDGFL3Q9Y3E1 203 aa17■□□□□ 0.31
TNFRSF1A-213ENST00000540022 HTR3EA5X5Y0 456 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GJE1A6NN92 205 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 EFCAB9A8MZ26 197 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR2T1O43869 369 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR7A10O76100 309 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNF708P17019 499 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MLLT10P55197 1068 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CLDN18P56856 261 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR7A5Q15622 319 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TMPPEQ6ZT21 453 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MFSD8Q8NHS3 518 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FAR1Q8WVX9 515 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 LIPHQ8WWY8 451 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MIB2Q96AX9 1013 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ADGRG7Q96K78 797 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TIMP4Q99727 224 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNF556Q9HAH1 456 aa16.99■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FLNCQ14315 2725 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 LIPT2A6NK58 231 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 EIF1AYO14602 144 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TNFSF11O14788 317 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNHIT1O43257 154 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SAGP10523 405 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 IGFBP5P24593 272 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 DIO1P49895 249 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 IL1RL1Q01638 556 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KLHL17Q6TDP4 642 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CD300LDQ6UXZ3 194 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ESPNLQ6ZVH7 1005 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GALNT5Q7Z7M9 940 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 PACRGLQ8N7B6 248 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR13C2Q8NGS9 318 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GPR137Q96N19 417 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 UCK2Q9BZX2 261 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FKRPQ9H9S5 495 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 NANSQ9NR45 359 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KRT84Q9NSB2 600 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SEC14L4Q9UDX3 406 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TRAPPC4Q9Y296 219 aa16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FLNBO75369 2602 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-213ENST00000540022 A0A1B0GTH9 108 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 AQP7O14520 342 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 HPRP00739 348 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MT-ATP6P00846 226 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TP53P04637 393 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ASAH2BP0C7U1 165 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SRYQ05066 204 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 COX10Q12887 443 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FHL1Q13642 323 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 C3AR1Q16581 482 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TAPBPLQ9BX59 468 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 C8orf4Q9NR00 106 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 PAPOLBQ9NRJ5 636 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ASF1BQ9NVP2 202 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 REV1Q9UBZ9 1251 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNF229Q9UJW7 825 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SIGLEC7Q9Y286 467 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 POFUT2Q9Y2G5 429 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 COL12A1Q99715 3063 aa16.97■□□□□ 0.31
TNFRSF1A-213ENST00000540022 UNC119BA6NIH7 251 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TTLL8A6PVC2 850 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SULT2B1O00204 365 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 DLGAP1O14490 977 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FZD7O75084 574 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 PMS2P2O95744 297 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GSTM3P21266 225 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GRPRP30550 384 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 VHLP40337 213 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TDGF1P3P51864 188 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR2B6P58173 313 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GXYLT1Q4G148 440 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 HBMQ6B0K9 141 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MAMDC2Q7Z304 686 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OAFQ86UD1 273 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KIF18BQ86Y91 864 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CHERPQ8IWX8 916 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR51A7Q8NH64 312 aa16.96■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR10D3Q8NH80 312 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms