RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLC17A1Q14916 467 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 TSC22D1Q15714 1073 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 FAM91A1Q658Y4 838 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 HACD2Q6Y1H2 254 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 RANBP3LQ86VV4 465 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 TAAR8Q969N4 342 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 CMTM5Q96DZ9 223 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 NAA11Q9BSU3 229 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 EVA1AQ9H8M9 152 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 TMEM27Q9HBJ8 222 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 SEC14L4Q9UDX3 406 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 ARL2BPQ9Y2Y0 163 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 FLVCR1Q9Y5Y0 555 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 A0A087WUJ7 227 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 ELOVL7A1L3X0 281 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 AQP7P3A6NL99 342 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 CPSF4LA6NMK7 179 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 FMO6PO60774 539 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 AHSA1O95433 338 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 ADAP00813 363 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 THBDP07204 575 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 PNMTP11086 282 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 PSMB1P20618 241 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 PRDX6P30041 224 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 KDELR2P33947 212 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 ENTPD8Q5MY95 495 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 ARPINQ7Z6K5 226 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 ZIC4Q8N9L1 334 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 MFSD8Q8NHS3 518 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 RNF217Q8TC41 542 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 SLC25A36Q96CQ1 311 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 SLC47A1Q96FL8 570 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 ZC3HAV1LQ96H79 300 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 CCT8L2Q96SF2 557 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 HOPXQ9BPY8 73 aaPredicted RBP16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 MED18Q9BUE0 208 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 TAPBPLQ9BX59 468 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 POLDIP3Q9BY77 421 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 EMC3Q9P0I2 261 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 NOSIPQ9Y314 301 aaKnown RBP16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 POLQO75417 2590 aa16.2■□□□□ 0.18
SNRPA1-203ENST00000540017 A0A1W2PPR1 153 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 FZD7O75084 574 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 IGHV3-9P01782 118 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 HRGP04196 525 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 POU4F3Q15319 338 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 LINC00114Q6XXX2 140 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 WDR88Q6ZMY6 472 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF100Q8IYN0 542 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 CLEC4MQ9H2X3 399 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 LIME1Q9H400 295 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 ARL8BQ9NVJ2 186 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 C6orf203Q9P0P8 240 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 SH3GLB1Q9Y371 365 aa16.19■□□□□ 0.18
SNRPA1-203ENST00000540017 DEFB108AA8MXU0 73 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 GPR171O14626 319 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 SHOX2O60902 331 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 GSK3BP49841 420 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 PSME3P61289 254 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 LTBQ06643 244 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 LRRC23Q53EV4 343 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 CYBRD1Q53TN4 286 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 SFRP5Q5T4F7 317 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF613Q6PF04 617 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 Q6ZT83 130 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 CARM1Q86X55 608 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 CDC20BQ86Y33 519 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 OR9K2Q8NGE7 335 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 ADAMTS16Q8TE57 1224 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 RASSF5Q8WWW0 418 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 PROX1Q92786 737 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 ZNF385AQ96PM9 386 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 ACTR6Q9GZN1 396 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 PCDHAC1Q9H158 963 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 ABCD2Q9UBJ2 740 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 AP3M1Q9Y2T2 418 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 GPR52Q9Y2T5 361 aa16.18■□□□□ 0.18
SNRPA1-203ENST00000540017 TRAV36DV7A0A075B6V5 113 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 CASKO14936 926 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 CBLP22681 906 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 CRYGSP22914 178 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 IGHV1-2P23083 117 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 OR1E2P47887 323 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 FOXG1P55316 489 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 SWT1Q5T5J6 900 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 FAM69AQ5T7M9 428 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 TMEM225Q6GV28 225 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 GPAT4Q86UL3 456 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 KDM8Q8N371 416 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 APH1AQ96BI3 265 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 S100PBPQ96BU1 408 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 LRRC37BQ96QE4 947 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 SF3B5Q9BWJ5 86 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 ALG2Q9H553 416 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 SELENONQ9NZV5 590 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 BAG5Q9UL15 447 aa16.17■□□□□ 0.18
SNRPA1-203ENST00000540017 PRR14LQ5THK1 2151 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 LRRN3E7EW58 273 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 M0R082 166 aa16.16■□□□□ 0.18
SNRPA1-203ENST00000540017 CHP2O43745 196 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms