RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PTGDSP41222 190 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 DCTN2Q13561 401 aaKnown RBP20.37■□□□□ 0.85
HOMER3-204ENST00000539827 ZNF791Q3KP31 576 aaPredicted RBP20.37■□□□□ 0.85
HOMER3-204ENST00000539827 LIPKQ5VXJ0 399 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 NANOGNBQ7Z5D8 188 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 M1APQ8TC57 530 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 LIN37Q96GY3 246 aaPredicted RBP20.37■□□□□ 0.85
HOMER3-204ENST00000539827 ZNF649Q9BS31 505 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 ZPBPQ9BS86 351 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 METTL7AQ9H8H3 244 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 PNMA8CA0A1B0GUJ8 204 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 SLC22A31A6NKX4 558 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 C9orf172C9J069 976 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 J3QRE1 110 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 ITGA10O75578 1167 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 GPX5O75715 221 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 SERPINI2O75830 405 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 HIST1H2ABP04908 130 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 F13BP05160 661 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 OTX2P32243 289 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 CTXN1P60606 82 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 NTRK2Q16620 822 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 ALG10Q5BKT4 473 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 HIST3H2AQ7L7L0 130 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 ZPLD1Q8TCW7 415 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 TM9SF4Q92544 642 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 HIST1H2ACQ93077 130 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 SLC25A36Q96CQ1 311 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 SPACA9Q96E40 222 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-204ENST00000539827 Q96M85 177 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 DDA1Q9BW61 102 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 COL25A1Q9BXS0 654 aaPredicted RBP20.36■□□□□ 0.85
HOMER3-204ENST00000539827 PPP4R1LQ9P1A2 415 aa20.36■□□□□ 0.85
HOMER3-204ENST00000539827 NSG1A0A0A6YYJ2 146 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 C12orf71A8MTZ7 269 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 ARPC3O15145 178 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 DKK1O94907 266 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 UGT2B10P36537 528 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 ENTPD1P49961 510 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 RPL18Q07020 188 aaKnown RBP20.35■□□□□ 0.85
HOMER3-204ENST00000539827 DGUOKQ16854 277 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 ARSKQ6UWY0 536 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 ADCK1Q86TW2 530 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 KLHL36Q8N4N3 616 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 GPX7Q96SL4 187 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-204ENST00000539827 NMNAT3Q96T66 252 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 OR11A1Q9GZK7 315 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 FKRPQ9H9S5 495 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 EXOSC4Q9NPD3 245 aaKnown RBP20.35■□□□□ 0.85
HOMER3-204ENST00000539827 TOR4AQ9NXH8 423 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 ZNF229Q9UJW7 825 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 VDAC3Q9Y277 283 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 TEX13CA0A0J9YWL9 993 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 SLC34A2O95436 690 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 TSPAN19P0C672 248 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 UQCRC1P31930 480 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 ARMC4Q5T2S8 1044 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 NDUFAF7Q7L592 441 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 PHC2Q8IXK0 858 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 OR51L1Q8NGJ5 315 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 SMAP2Q8WU79 429 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-204ENST00000539827 SPRYD4Q8WW59 207 aaPredicted RBP20.35■□□□□ 0.85
HOMER3-204ENST00000539827 TMEM234Q8WY98 164 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 PTDSS2Q9BVG9 487 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 FOXJ2Q9P0K8 574 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 SEC14L4Q9UDX3 406 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 TCFL5Q9UL49 500 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 PMF1-BGLAPU3KQ54 211 aa20.35■□□□□ 0.85
HOMER3-204ENST00000539827 IGHEP01854 428 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 CD14P08571 375 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 PRKCAP17252 672 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 LIMK1P53667 647 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 TMED1Q13445 227 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 IL20RBQ6UXL0 311 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 USP43Q70EL4 1123 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 PPP1R32Q7Z5V6 425 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 SLC15A4Q8N697 577 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 ZFP41Q8N8Y5 198 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 ZNF485Q8NCK3 441 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 NPEPL1Q8NDH3 523 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 OR10H4Q8NGA5 316 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 ARHGAP9Q9BRR9 750 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 CDCP1Q9H5V8 836 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 CCDC187A0A096LP49 1063 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 A8MVM7 634 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 LRRTM2O43300 516 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 LALBAP00709 142 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 CPEP16870 476 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 SERPINB10P48595 397 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 INPP5JQ15735 1006 aaPredicted RBP20.34■□□□□ 0.85
HOMER3-204ENST00000539827 TIMM50Q3ZCQ8 353 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 C1orf140Q5VVS0 124 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 ACBD7Q8N6N7 88 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 ZMYND19Q96E35 227 aaPredicted RBP20.34■□□□□ 0.85
HOMER3-204ENST00000539827 DDOQ99489 341 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 JAM3Q9BX67 310 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 SPRY4Q9C004 299 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 ADGRL4Q9HBW9 690 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 PARD6AQ9NPB6 346 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 NDUFB11Q9NX14 153 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms