RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 POU3F1Q03052 451 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SLC22A6Q4U2R8 563 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SYT6Q5T7P8 510 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 GPR157Q5UAW9 335 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 ANKRD34AQ69YU3 496 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 RPL22L1Q6P5R6 122 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 RAB11FIP2Q7L804 512 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 GHSRQ92847 366 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF281Q9Y2X9 895 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 MRPS2Q9Y399 296 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM72A0PK05 275 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 ACVR1Q04771 509 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TRIP6Q15654 476 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 KRBOX4Q5JUW0 171 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TPRA1Q86W33 373 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 ACBD4Q8NC06 268 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 OR52I1Q8NGK6 324 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SYT3Q9BQG1 590 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SAV1Q9H4B6 383 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 NT5DC2Q9H857 520 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SIDT1Q9NXL6 827 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 PLEKHM1Q9Y4G2 1056 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 PCDHGA6Q9Y5G7 932 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 F8W036 122 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 NUDT21O43809 227 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 HRGP04196 525 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 CCL11P51671 97 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 BLOC1S1P78537 153 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM244Q5VVB8 128 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 LCN10Q6JVE6 187 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SLC35D2Q76EJ3 337 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 GIMAP1Q8WWP7 306 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 SFXN2Q96NB2 322 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 C7orf50Q9BRJ6 194 aaKnown RBP13.49□□□□□ -0.25
CACNB1-206ENST00000539338 TMEM38AQ9H6F2 299 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 OSGIN1Q9UJX0 560 aa13.49□□□□□ -0.25
CACNB1-206ENST00000539338 FAM230AA0A1W2PPH8 454 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CDHR4A6H8M9 788 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 AGPAT2O15120 278 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CSNK1G2P78368 415 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 MYBPHQ13203 477 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 DUSP7Q16829 419 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 RNF113BQ8IZP6 322 aaKnown RBP13.48□□□□□ -0.25
CACNB1-206ENST00000539338 MYEOVQ96EZ4 313 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 DIMT1Q9UNQ2 313 aaKnown RBP13.48□□□□□ -0.25
CACNB1-206ENST00000539338 NSG1A0A0A6YYJ2 146 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 OR2A25A4D2G3 310 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 GJE1A6NN92 205 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 PLPP1O14494 284 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 PRRG2O14669 202 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CPNE6O95741 557 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 IFNGR1P15260 489 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 GABRR1P24046 479 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 BCL6P41182 706 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CAV2P51636 162 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 ISL1P61371 349 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CRMP1Q14194 572 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 OR5D14Q8NGL3 314 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 OR51Q1Q8NH59 317 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 LOXL4Q96JB6 756 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 DNTTIP1Q9H147 329 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 SLC6A17Q9H1V8 727 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 DVL2O14641 736 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 LINC01565O15544 149 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 RAB38P57729 211 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 TSSK4Q6SA08 328 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 ADAMTSL4Q6UY14 1074 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 MMP21Q8N119 569 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 OLIG1Q8TAK6 271 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 NMNAT3Q96T66 252 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 MED17Q9NVC6 651 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 ASIC5Q9NY37 505 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF891A8MT65 544 aaPredicted RBP13.48□□□□□ -0.25
CACNB1-206ENST00000539338 PIP5K1CO60331 668 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 IGLV3-25P01717 112 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 SBK3P0C264 359 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CDK2P24941 298 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 IL13RA1P78552 427 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CYCSP99999 105 aaKnown RBP13.48□□□□□ -0.25
CACNB1-206ENST00000539338 CTU2Q2VPK5 515 aaKnown RBP13.48□□□□□ -0.25
CACNB1-206ENST00000539338 GDF7Q7Z4P5 450 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 S100PBPQ96BU1 408 aa13.48□□□□□ -0.25
CACNB1-206ENST00000539338 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 JUNBP17275 347 aaPredicted RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 RIPPLY1Q0D2K3 151 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 HENMT1Q5T8I9 393 aaKnown RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 PRR18Q8N4B5 295 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 GLYATL2Q8WU03 294 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 SGCZQ96LD1 299 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 MBOAT4Q96T53 435 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 PDFQ9HBH1 243 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 SLC25A37Q9NYZ2 338 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 TRBV11-1A0A0K0K1C0 115 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 NUPL2O15504 423 aaKnown RBP13.47□□□□□ -0.25
CACNB1-206ENST00000539338 ZNF264O43296 627 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 GAAP10253 952 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 MAKP20794 623 aa13.47□□□□□ -0.25
CACNB1-206ENST00000539338 NXNL2Q5VZ03 156 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms