RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 A0A0G2JND7 137 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 LIPT2A6NK58 231 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 OR5H1A6NKK0 313 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 TMEM229AB2RXF0 380 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 C5orf58C9J3I9 102 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 SMAD7O15105 426 aaKnown RBP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 EIF1BO60739 113 aaKnown RBP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 NPIPB7O75200 414 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 CNOT4O95628 575 aaKnown RBP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 GPIP06744 558 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 SOD3P08294 240 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 ITGA5P08648 1049 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 RPS4XP62701 263 aaKnown RBP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 CDK6Q00534 326 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 SLC17A1Q14916 467 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 ZNF672Q499Z4 452 aaPredicted RBP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 METTL21CQ5VZV1 264 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 REEP3Q6NUK4 255 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 PAQR6Q6TCH4 344 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 MUCL1Q96DR8 90 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 COX4I2Q96KJ9 171 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 USB1Q9BQ65 265 aaKnown RBP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 TMEM120AQ9BXJ8 343 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 ASB6Q9NWX5 421 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 MALT1Q9UDY8 824 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 TRIM33Q9UPN9 1127 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 CORO2BQ9UQ03 480 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 SLC9A8Q9Y2E8 581 aa13.18□□□□□ -0.3
RAB40B-202ENST00000538809 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.3
RAB40B-202ENST00000538809 ABCD4O14678 606 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 FZD7O75084 574 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 HOXB4P17483 251 aaPredicted RBP13.17□□□□□ -0.3
RAB40B-202ENST00000538809 ZNF83P51522 516 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 ATP5J2P56134 94 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 SPOCK1Q08629 439 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 SELPLGQ14242 412 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 CLEC9AQ6UXN8 241 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 DHDDSQ86SQ9 333 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 GPAT4Q86UL3 456 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 OR9K2Q8NGE7 335 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 ANKRD27Q96NW4 1050 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 CGREF1Q99674 301 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 TAPBPLQ9BX59 468 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 TRIM2Q9C040 744 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 ARMC7Q9H6L4 198 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 SLC7A10Q9NS82 523 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 ZNF701Q9NV72 531 aaPredicted RBP13.17□□□□□ -0.3
RAB40B-202ENST00000538809 TAS2R16Q9NYV7 291 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 UPB1Q9UBR1 384 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.17□□□□□ -0.3
RAB40B-202ENST00000538809 NDUFAF1Q9Y375 327 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 MAGED1Q9Y5V3 778 aaPredicted RBP13.17□□□□□ -0.3
RAB40B-202ENST00000538809 ZANQ9Y493 2812 aa13.17□□□□□ -0.3
RAB40B-202ENST00000538809 AQP7P3A6NL99 342 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 A8MVM7 634 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 EVPLLA8MZ36 301 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 TPST1O60507 370 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 HTR2AP28223 471 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 CDKN1AP38936 164 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 P2RY4P51582 365 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 CDH11P55287 796 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 PCBP3P57721 371 aaKnown RBP13.16□□□□□ -0.3
RAB40B-202ENST00000538809 LTBQ06643 244 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 SCARB2Q14108 478 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 TSPO2Q5TGU0 170 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 C1orf140Q5VVS0 124 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 C6orf89Q6UWU4 347 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-202ENST00000538809 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 SMAP2Q8WU79 429 aaPredicted RBP13.16□□□□□ -0.3
RAB40B-202ENST00000538809 ZNF385AQ96PM9 386 aaKnown RBP13.16□□□□□ -0.3
RAB40B-202ENST00000538809 CCDC134Q9H6E4 229 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 FGFR1OP2Q9NVK5 253 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 SLC25A15Q9Y619 301 aa13.16□□□□□ -0.3
RAB40B-202ENST00000538809 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 ALPK2Q86TB3 2170 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 FN1P02751 2386 aaKnown RBP13.15□□□□□ -0.3
RAB40B-202ENST00000538809 FTCDNL1E5RQL4 147 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PDLIM1O00151 329 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 FBP2O00757 339 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 ANGPT2O15123 496 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 DANCRP0C864 163 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PAX1P15863 534 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PTNP21246 168 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 AQP1P29972 269 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 SLC25A3Q00325 362 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 EGR4Q05215 589 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 LGALS3BPQ08380 585 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 GABRA6Q16445 453 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PGGHGQ32M88 737 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 AAED1Q7RTV5 226 aa13.15□□□□□ -0.3
RAB40B-202ENST00000538809 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms