RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 BARHL1Q9BZE3 327 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 TMEM185BQ9H7F4 350 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 NDUFB11Q9NX14 153 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF337Q9Y3M9 751 aa12.83□□□□□ -0.36
ACTN1-205ENST00000538545 DOCK10Q96BY6 2186 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 CTDSP2O14595 271 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 SELENOFO60613 162 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 KLK3P07288 261 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 SLC2A5P22732 501 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 AHCYP23526 432 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 FABP5Q01469 135 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 RPL18Q07020 188 aaKnown RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 C19orf57Q0VDD7 668 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 IL11RAQ14626 422 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 CRTC2Q53ET0 693 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 USP43Q70EL4 1123 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 OR5W2Q8NH69 310 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ADAM19Q9H013 955 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 RPRD1BQ9NQG5 326 aaKnown RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ANKRD10Q9NXR5 420 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 MYOTQ9UBF9 498 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 PISDQ9UG56 409 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 EXOGQ9Y2C4 368 aaKnown RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 BOD1L1Q8NFC6 3051 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 TMEM72A0PK05 275 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 OR6C70A6NIJ9 312 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 CD8B2A6NJW9 211 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 J3QRE1 110 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 CD8BP10966 210 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 OR12D2P58182 307 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 IFITM3Q01628 133 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 VASNQ6EMK4 673 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 C16orf87Q6PH81 154 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ADGRG3Q86Y34 549 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF440Q8IYI8 595 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF511Q8NB15 262 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 OR6Q1Q8NGQ2 317 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 SLC39A7Q92504 469 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ARL5BQ96KC2 179 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 PLGRKTQ9HBL7 147 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 TXNL4BQ9NX01 149 aaKnown RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 KLRF1Q9NZS2 232 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 COL27A1Q8IZC6 1860 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-205ENST00000538545 MED13Q9UHV7 2174 aa12.82□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF318Q5VUA4 2279 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 A0A1W2PNU3 283 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 A0A1W2PQL4 384 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 TMEM129A0AVI4 362 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 DAPL1A0PJW8 107 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SHISA3A0PJX4 238 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 METTL15A6NJ78 407 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 H3BML4 177 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 IGHA1P01876 353 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SBK2P0C263 348 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 INAQ16352 499 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF829Q3KNS6 432 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF404Q494X3 552 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ALG10Q5BKT4 473 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 RPL13AP3Q6NVV1 102 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 LEG1Q6P5S2 330 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 TMEM205Q6UW68 189 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ACBD7Q8N6N7 88 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 LSM14AQ8ND56 463 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 NPEPL1Q8NDH3 523 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 PSD4Q8NDX1 1056 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 B4GALNT2Q8NHY0 566 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SMPDL3BQ92485 455 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SRA1Q9HD15 236 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 NRIP3Q9NQ35 241 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 EXOSC3Q9NQT5 275 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 GPN3Q9UHW5 284 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SF3B6Q9Y3B4 125 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 A0A087WV48 116 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 OR6C76A6NM76 312 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 J3QLW9 94 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SUSD5O60279 629 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 CDRT1O95170 752 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 PNMTP11086 282 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 CPEP16870 476 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF19P17023 458 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 P2RX1P51575 399 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 RPS4XP62701 263 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 E2F1Q01094 437 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ATP1A4Q13733 1029 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 PCOLCEQ15113 449 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 FAM27D1Q5T7N8 215 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ZNF322Q6U7Q0 402 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 TIPARPQ7Z3E1 657 aaKnown RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 SLC35B4Q969S0 331 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 DEFB126Q9BYW3 111 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 AKIP1Q9NQ31 210 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 TAS2R10Q9NYW0 307 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 CAB39Q9Y376 341 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-205ENST00000538545 HS3ST3B1Q9Y662 390 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 FRYQ5TBA9 3013 aa12.81□□□□□ -0.36
ACTN1-205ENST00000538545 TMED7-TICAM2A0A0A6YYA0 188 aa12.8□□□□□ -0.36
ACTN1-205ENST00000538545 NCR1O76036 304 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms