RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 NRIP3Q9NQ35 241 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 COMMD3Q9UBI1 195 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 RPS6KB2Q9UBS0 482 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 FBXL4Q9UKA2 621 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 ITGB1BP2Q9UKP3 347 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 SCN2AQ99250 2005 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 PTPRBP23467 1997 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 TP53BP1Q12888 1972 aaPredicted RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 TRAV1-2A0A0B4J238 106 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 IGHV5-51A0A0C4DH38 117 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MEIOCA2RUB1 952 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MCIDASD6RGH6 385 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 IMPA2O14732 288 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 IDH3BO43837 385 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CSTAP01040 98 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MRPL3P09001 348 aaKnown RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR2T7P0C7T2 308 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 APEHP13798 732 aaKnown RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 HIST1H1CP16403 213 aaKnown RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 MAOAP21397 527 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CD1CP29017 333 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SHC1P29353 583 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 LCN1P31025 176 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 KIR2DL3P43628 341 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 PPICP45877 212 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MAP2K3P46734 347 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 DIO1P49895 249 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 GFERP55789 205 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 NRG3P56975 720 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SLC37A1P57057 533 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR12D2P58182 307 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 NXPH1P58417 271 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 HSF2Q03933 536 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 GRM7Q14831 915 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 P2RY14Q15391 338 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 TAB1Q15750 504 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CARTPTQ16568 116 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 NDUFAF6Q330K2 333 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 C14orf28Q4W4Y0 310 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 FCRLBQ6BAA4 426 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 UNQ9370/PRO34162Q6UXP9 181 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SSX6Q7RTT6 188 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 NUP54Q7Z3B4 507 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 ATG4DQ86TL0 474 aaPredicted RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 LRRC28Q86X40 367 aaPredicted RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 GATAD2AQ86YP4 633 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SLITRK4Q8IW52 837 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CADM2Q8N3J6 435 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MS4A15Q8N5U1 240 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 ZNF614Q8N883 585 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 EXD3Q8N9H8 876 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SCAIQ8N9R8 606 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CYB561A3Q8NBI2 242 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 NPEPL1Q8NDH3 523 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 C7orf57Q8NEG2 295 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SDR9C7Q8NEX9 313 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CADM4Q8NFZ8 388 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR52E2Q8NGJ4 325 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR5M3Q8NGP4 307 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR2I1PQ8NGU4 316 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR2T27Q8NH04 317 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR5J2Q8NH18 312 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR4C3Q8NH37 302 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR51Q1Q8NH59 317 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR14A16Q8NHC5 309 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 ABHD4Q8TB40 342 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 LMX1AQ8TE12 382 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MVB12AQ96EY5 273 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 MMABQ96EY8 250 aaPredicted RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 ST6GAL2Q96JF0 529 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SLC46A1Q96NT5 459 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 OR1F2PQ96R84 312 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CNN2Q99439 309 aaKnown RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 SLC38A3Q99624 504 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 PPIL3Q9H2H8 161 aaKnown RBP8.45□□□□□ -1.06
DDB1-211ENST00000538280 PDE7BQ9NP56 450 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 B3GAT2Q9NPZ5 323 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 TMEM9BQ9NQ34 198 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 CYSLTR2Q9NS75 346 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SEMA5BQ9P283 1151 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 POU2F3Q9UKI9 436 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 HIF3AQ9Y2N7 669 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 SLC6A5Q9Y345 797 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 ZNF337Q9Y3M9 751 aa8.45□□□□□ -1.06
DDB1-211ENST00000538280 PCNX2A6NKB5 2137 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 A0A0B4J293 547 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 FRG2CA6NGY1 282 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 LMO7DNF2Z398 122 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 J3QLW9 94 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 OIP5O43482 229 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 TRIM3O75382 744 aaPredicted RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 CDC123O75794 336 aaPredicted RBP8.44□□□□□ -1.06
DDB1-211ENST00000538280 CCNKO75909 580 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 TXNDC12O95881 172 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 ZNF19P17023 458 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 ELK1P19419 428 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 MYL9P24844 172 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 HLA-DMAP28067 261 aa8.44□□□□□ -1.06
DDB1-211ENST00000538280 RFX3P48380 749 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms