RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 WDR45Q9Y484 360 aa3.92□□□□□ -1.78
SNHG1-208ENST00000538266 SNX13Q9Y5W8 968 aa3.92□□□□□ -1.78
SNHG1-208ENST00000538266 CHCHD2Q9Y6H1 151 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-208ENST00000538266 TPRP12270 2363 aaKnown RBP3.92□□□□□ -1.78
SNHG1-208ENST00000538266 CHD8Q9HCK8 2581 aa3.92□□□□□ -1.78
SNHG1-208ENST00000538266 MED13Q9UHV7 2174 aa3.92□□□□□ -1.78
SNHG1-208ENST00000538266 TNRC6AQ8NDV7 1962 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 TRBV5-3A0A0A0MS03 114 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 DHRS12A0PJE2 317 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 AQP12BA6NM10 295 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 G3V3Y1 287 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 FXYD1O00168 92 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 GTPBP1O00178 669 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 TFECO14948 347 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SCO2O43819 266 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 KIAA0513O60268 411 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF354AO60765 605 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ATP6V1G1O75348 118 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 GMNNO75496 209 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 NEURL1O76050 574 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PDE9AO76083 593 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 RASAL1O95294 804 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CRYABP02511 175 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SP1P08047 785 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CYP4B1P13584 511 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 IL7RP16871 459 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF12P17014 697 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF24P17028 368 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 HOXB9P17482 250 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 GPX2P18283 190 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 RHCEP18577 417 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 TCN1P20061 433 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CNR1P21554 472 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 MYF6P23409 242 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PSMA4P25789 261 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ELAVL4P26378 380 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PCSK6P29122 969 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 AQP1P29972 269 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PCGF2P35227 344 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 DCTP40126 519 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 MAP3K8P41279 467 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PSMD7P51665 324 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CCR4P51679 360 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SLC7A2P52569 658 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 UCP3P55916 312 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 BLOC1S1P78537 153 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CDK6Q00534 326 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 MS4A2Q01362 244 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 KLRB1Q12918 225 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CBX3Q13185 183 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SNTA1Q13424 505 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SCARB2Q14108 478 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 LARS2Q15031 903 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 TOMM20Q15388 145 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ATP6AP1Q15904 470 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 NRF1Q16656 503 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF630Q2M218 657 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 RUNDC3AQ59EK9 446 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 INTS11Q5TA45 600 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PRAMEF8Q5VWM4 474 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PRAMEF7Q5VXH5 474 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 LCN8Q6JVE9 175 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SLC25A25Q6KCM7 469 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 HEPHL1Q6MZM0 1159 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 REEP3Q6NUK4 255 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SLC30A6Q6NXT4 461 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ERICH5Q6P6B1 374 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 TTC33Q6PID6 262 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 Q6ZNX1 250 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 Q6ZPA2 131 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 Q6ZS92 163 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZBTB49Q6ZSB9 765 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 GALNTL5Q7Z4T8 443 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 MDGA2Q7Z553 956 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SERPINA11Q86U17 422 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 SLC22A16Q86VW1 577 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 IFNEQ86WN2 208 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CLVS1Q8IUQ0 354 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 MISPQ8IVT2 679 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 AQP12AQ8IXF9 295 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 MSRB3Q8IXL7 192 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PEX5LQ8IYB4 626 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF619Q8N2I2 560 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZNF786Q8N393 782 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 LNX2Q8N448 690 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 TMCO5AQ8N6Q1 288 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 RNF148Q8N7C7 305 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 RBMXL3Q8N7X1 1067 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 EXD3Q8N9H8 876 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 ZBTB8BQ8NAP8 495 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 POGLUT1Q8NBL1 392 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 LSM14AQ8ND56 463 aaKnown RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 CHDHQ8NE62 594 aaPredicted RBP3.91□□□□□ -1.78
SNHG1-208ENST00000538266 OR2T12Q8NG77 320 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 OR2M7Q8NG81 312 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 OR1J4Q8NGS1 313 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 OR10A6Q8NH74 314 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 NFKBIDQ8NI38 313 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 BBS10Q8TAM1 723 aa3.91□□□□□ -1.78
SNHG1-208ENST00000538266 PAQR8Q8TEZ7 354 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms