RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 OR8H3Q8N146 312 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 OR4D10Q8NGI6 311 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 OR2V1Q8NHB1 315 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 YIPF5Q969M3 257 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 OR52B2Q96RD2 323 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 SDF2Q99470 211 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 COPS4Q9BT78 406 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 CXorf36Q9H7Y0 433 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF556Q9HAH1 456 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 ELOVL5Q9NYP7 299 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 NDRG3Q9UGV2 375 aa3.26□□□□□ -1.89
PTPN22-211ENST00000538253 TRANK1O15050 2925 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 IGHV3-20A0A0C4DH32 117 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 A0A1B0GV90 55 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 A6NIZ1 184 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 A8MVM7 634 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PPP6CO00743 305 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SULT1C4O75897 302 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NADKO95544 446 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RAB3DO95716 219 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TBX6O95947 436 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TPOP07202 933 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 FAM87AP0C7U9 286 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 OR12D1P0DN82 309 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TACR1P25103 407 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CHRNB4P30926 498 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SLC1A3P43003 542 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RAP1BP61224 184 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RAP1AP62834 184 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SLC3A1Q07837 685 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 EPS8Q12929 822 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ITGADQ13349 1161 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRAM2Q15035 370 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 DUSP7Q16829 419 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 LINC00303Q3SY05 128 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 LCN1P1Q5VSP4 162 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF544Q6NX49 715 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 Q6ZPB1 254 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRILQ7L0X0 811 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CDH24Q86UP0 819 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 P2RY8Q86VZ1 359 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SPPL2CQ8IUH8 684 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SULF2Q8IWU5 870 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 MMP21Q8N119 569 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 WFDC12Q8WWY7 111 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PSMF1Q92530 271 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 STMN2Q93045 179 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RFKQ969G6 155 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRIM63Q969Q1 353 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 C1GALT1C1Q96EU7 318 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KLHL15Q96M94 604 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CPPED1Q9BRF8 314 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TMEM43Q9BTV4 400 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 FNDC11Q9BVV2 318 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TTTY12Q9BZ98 90 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 OPN3Q9H1Y3 402 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 OR51B6Q9H340 312 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 C1orf198Q9H425 327 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RANBP3Q9H6Z4 567 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ZDHHC11Q9H8X9 412 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SLCO1B3Q9NPD5 702 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GPATCH2Q9NW75 528 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 AURKCQ9UQB9 309 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SAMHD1Q9Y3Z3 626 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CEP250Q9BV73 2442 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RP1P56715 2156 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRBV23-1A0A0A0MS06 115 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SERTM2A0A1B0GWG4 89 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 C12orf71A8MTZ7 269 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NPIPA5E9PKD4 350 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 FADS1O60427 444 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GMDSO60547 372 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ICOSLGO75144 302 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 DEAF1O75398 565 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 AGFG2O95081 481 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 HTR3BO95264 441 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PGM3O95394 542 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ACP2P11117 423 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 BMP4P12644 408 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 S1PR1P21453 382 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GALP22466 123 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 ACVR2AP27037 513 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TIMP3P35625 211 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 NUP62P37198 522 aaPredicted RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RPL35P42766 123 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 CA7P43166 264 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 PGGT1BP53609 377 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TPTEP56180 551 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 YBX1P67809 324 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 HTD2P86397 168 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 C1DQ13901 141 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 GPR68Q15743 365 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 FAM189A2Q15884 450 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 DUSP5Q16690 384 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 RFX4Q33E94 735 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 SLC36A3Q495N2 470 aa3.25□□□□□ -1.89
PTPN22-211ENST00000538253 TRMT12Q53H54 448 aaKnown RBP3.25□□□□□ -1.89
PTPN22-211ENST00000538253 EXOSC6Q5RKV6 272 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms