RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 TMEM71Q6P5X7 295 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 CNIH2Q6PI25 160 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 MAMSTRQ6ZN01 415 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TMEM91Q6ZNR0 172 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 GDPD3Q7L5L3 318 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 PXKQ7Z7A4 578 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 C10orf53Q8N6V4 93 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 CYB561A3Q8NBI2 242 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 OR2T4Q8NH00 348 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 OR6S1Q8NH40 331 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 OR4K13Q8NH42 304 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 OR1L3Q8NH93 324 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 MOSPD2Q8NHP6 518 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ENKURQ8TC29 256 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ZNF721Q8TF20 911 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 SNX33Q8WV41 574 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 HPS1Q92902 700 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TSLPQ969D9 159 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ADIPOR1Q96A54 375 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ZNF501Q96CX3 271 aaPredicted RBP6.06□□□□□ -1.44
USP28-206ENST00000538224 ZC3HAV1LQ96H79 300 aaKnown RBP6.06□□□□□ -1.44
USP28-206ENST00000538224 CMTM3Q96MX0 182 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 AGAP4Q96P64 663 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 SNX18Q96RF0 628 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 GAL3ST4Q96RP7 486 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TBX5Q99593 518 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ELF4Q99607 663 aaPredicted RBP6.06□□□□□ -1.44
USP28-206ENST00000538224 MRI1Q9BV20 369 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 HCAR1Q9BXC0 346 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TBL1XR1Q9BZK7 514 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 NMNAT2Q9BZQ4 307 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 SLC7A5P2Q9GIP4 190 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 WWTR1Q9GZV5 400 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ENKD1Q9H0I2 346 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ISG20L2Q9H9L3 353 aaKnown RBP6.06□□□□□ -1.44
USP28-206ENST00000538224 MOV10Q9HCE1 1003 aaKnown RBP6.06□□□□□ -1.44
USP28-206ENST00000538224 MMP25Q9NPA2 562 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 FGF21Q9NSA1 209 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 C14orf119Q9NWQ9 140 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 UCKL1Q9NWZ5 548 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 ABRACLQ9P1F3 81 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 COMMD3Q9UBI1 195 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TBC1D24Q9ULP9 559 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TMEM184BQ9Y519 407 aaPredicted RBP6.06□□□□□ -1.44
USP28-206ENST00000538224 NPFFR2Q9Y5X5 522 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 TMEM14AQ9Y6G1 99 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 MAU2Q9Y6X3 613 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 CPAMD8Q8IZJ3 1885 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 MPDZO75970 2070 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 XIRP2A4UGR9 3374 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 PCDH15Q96QU1 1955 aa6.06□□□□□ -1.44
USP28-206ENST00000538224 IGKV1D-42A0A075B6H8 117 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 IGLV3-12A0A075B6K2 115 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 A0A1B0GVT2 93 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 OR6C70A6NIJ9 312 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 FAM25AB3EWG3 89 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 FAM25CB3EWG5 89 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 FAM25GB3EWG6 89 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 K7ESF4 209 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 PDCD5O14737 125 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 FLRT2O43155 660 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 HCRTR2O43614 444 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 NDUFB5O43674 189 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 TSPAN2O60636 221 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 HPGDSO60760 199 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ICOSLGO75144 302 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 TPPPO94811 219 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ZNF432O94892 652 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 KRT8P05787 483 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 CSF3P09919 207 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 ASAH2BP0C7U1 165 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 RAB3BP20337 219 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 BCKDHBP21953 392 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 AZGP1P25311 298 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 EPHA8P29322 1005 aaPredicted RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 PYCR1P32322 319 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 CASP3P42574 277 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 HTR3AP46098 478 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 MAP2K3P46734 347 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 TMED10P49755 219 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 GDI2P50395 445 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 P2RX1P51575 399 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 POLR2HP52434 150 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 SLC26A5P58743 744 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SIRPAP78324 504 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 PITPNAQ00169 270 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SLC3A1Q07837 685 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 KCNAB1Q14722 419 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 MFSD13AQ14CX5 517 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 QPRTQ15274 297 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SF3A2Q15428 464 aaKnown RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 TAB1Q15750 504 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 CD226Q15762 336 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 CCDC85BQ15834 202 aaPredicted RBP6.05□□□□□ -1.44
USP28-206ENST00000538224 NDUFAF6Q330K2 333 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 YIF1BQ5BJH7 314 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 IDNKQ5T6J7 187 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 FCRLBQ6BAA4 426 aa6.05□□□□□ -1.44
USP28-206ENST00000538224 SFXN4Q6P4A7 337 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms