RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 F8P00451 2351 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PLXNA1Q9UIW2 1896 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF860A6NHJ4 632 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 G3V3Q6 166 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 HPNP05981 417 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 HNRNPA2B1P22626 353 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RAB40BQ12829 278 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PIN1Q13526 163 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MS4A13Q5J8X5 152 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF836Q6ZNA1 936 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TRAM1L1Q8N609 369 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 REEP6Q96HR9 211 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 DPH1Q9BZG8 443 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GPR88Q9GZN0 384 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SLC39A9Q9NUM3 307 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 KLRF1Q9NZS2 232 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 NUMBLQ9Y6R0 609 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TRBV4-1A0A0J9YWV2 114 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PHYHO14832 338 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GPR37L1O60883 481 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 POP7O75817 140 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PMP2P02689 132 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PRNPP04156 253 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 KITLGP21583 273 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM268Q5VZI3 342 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR8J2Q8NGG1 315 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR1S2Q8NGQ3 325 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR2G3Q8NGZ4 309 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 LILRB1Q8NHL6 650 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 AKR1E2Q96JD6 320 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TEPSINQ96N21 525 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 FAM173AQ9BQD7 235 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CWH43Q9H720 699 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 Q9N2J8 555 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 LEUTXA8MZ59 168 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PPP5D1E7EU14 171 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ACP2P11117 423 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 HLA-DOBP13765 273 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF28P17035 718 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MPGP29372 298 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TGFBR1P36897 503 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SCNN1AP37088 669 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CRYBB1P53674 252 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RPL24P83731 157 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF239Q16600 458 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR52W1Q6IF63 320 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CMTM1Q8IZ96 169 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF778Q96MU6 729 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZIC5Q96T25 663 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MED18Q9BUE0 208 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TINAGL1Q9GZM7 467 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GORASP2Q9H8Y8 452 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF724A8MTY0 619 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GPR39O43194 453 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 GABRR2P28476 465 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ARSDP51689 593 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CTXN1P60606 82 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PSPHP78330 225 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MFGE8Q08431 387 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PNPLA2Q96AD5 504 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TRIB3Q96RU7 358 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MAST2Q6P0Q8 1798 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 BDP1A6H8Y1 2624 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TAS2R38P59533 333 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SERPINA11Q86U17 422 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PPP1R3BQ86XI6 285 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TSTD1Q8NFU3 115 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF461Q8TAF7 563 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 APH1BQ8WW43 257 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 YIPF6Q96EC8 236 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RPH3ALQ9UNE2 315 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 MMP24Q9Y5R2 645 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF646O15015 1829 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 RNF212BA8MTL3 300 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 H7BY64 318 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SLC16A6O15403 523 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF623O75123 536 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SOX9P48436 509 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 EEF1A1P68104 462 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 EEF1A1P5Q5VTE0 462 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 SAXO2Q658L1 398 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PM20D1Q6GTS8 502 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 HSD17B11Q8NBQ5 300 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR56B1Q8NGI3 324 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR4D10Q8NGI6 311 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR52I1Q8NGK6 324 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ABHD4Q8TB40 342 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PRAP1Q96NZ9 151 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 NIFKQ9BYG3 293 aaKnown RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 HIPK2Q9H2X6 1198 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 BTNL2Q9UIR0 455 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 CCSO14618 274 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 ADH1BP00325 375 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PSMB3P49720 205 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 PDLIM3Q53GG5 364 aaPredicted RBP5.3□□□□□ -1.56
CSMD1-215ENST00000537824 TBPL2Q6SJ96 375 aa5.3□□□□□ -1.56
CSMD1-215ENST00000537824 OR2W3Q7Z3T1 314 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms