RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TMEM115Q12893 351 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SNTB1Q13884 538 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF705AQ6ZN79 300 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MOB3CQ70IA8 216 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF679Q8IYX0 411 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FAM71E2Q8N5Q1 922 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 OR2A12Q8NGT7 310 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 GAL3ST4Q96RP7 486 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DPH7Q9BTV6 452 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MYNNQ9NPC7 610 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 H7C1Q1 480 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 MPC2O95563 127 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CXCR1P25024 350 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ATP5A1P25705 553 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CSNK1EP49674 416 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 HLXQ14774 488 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 RBMS2Q15434 407 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DUSP28Q4G0W2 176 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PRAMEF8Q5VWM4 474 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PRAMEF7Q5VXH5 474 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM207Q6UWW9 146 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LBX2Q6XYB7 198 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 TECPR1Q7Z6L1 1165 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 LINC01599Q8WXQ3 324 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SMPDL3AQ92484 453 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 DVL3Q92997 716 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 FAM46BQ96A09 425 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 ENKD1Q9H0I2 346 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SUV39H2Q9H5I1 410 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 SRA1Q9HD15 236 aaKnown RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 RXFP3Q9NSD7 469 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 RASL12Q9NYN1 266 aa5.03□□□□□ -1.6
PTPRD-213ENST00000537002 PCYT1BQ9Y5K3 369 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-213ENST00000537002 CDHR4A6H8M9 788 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GPR37L1O60883 481 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 DUSP11O75319 330 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ACHEP22303 614 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ETV5P41161 510 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 MPEG1Q2M385 716 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 FAAP20Q6NZ36 180 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 FAM83HQ6ZRV2 1179 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 CD163Q86VB7 1156 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 NRROSQ86YC3 692 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 IL17FQ96PD4 163 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SEMA4CQ9C0C4 833 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RNF122Q9H9V4 155 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 LRFN1Q9P244 771 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TINAGQ9UJW2 476 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 DOCK1Q14185 1865 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TRAV1-2A0A0B4J238 106 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 CCSO14618 274 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 HPP00738 406 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 KNG1P01042 644 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 CD1AP06126 327 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 EIF4EP06730 217 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 HBQ1P09105 142 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 C1GALT1C1LP0DN25 315 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 APEHP13798 732 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 PTGER1P34995 402 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GIPRP48546 466 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 COMMD6Q7Z4G1 85 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 PIANPQ8IYJ0 282 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RAB3CQ96E17 227 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 BCO1Q9HAY6 547 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ACSS1Q9NUB1 689 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 CCL27Q9Y4X3 112 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF638Q14966 1978 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 NUP205Q92621 2012 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TSPAN6O43657 245 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GJA1P17302 382 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 AMY2BP19961 511 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 STARD6P59095 220 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GNMTQ14749 295 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 RNF151Q2KHN1 245 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 MANEALQ5VSG8 457 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ADAM5Q6NVV9 412 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SLC29A4Q7RTT9 530 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ABI3BPQ7Z7G0 1075 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 PTOV1Q86YD1 416 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ARHGAP12Q8IWW6 846 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TRMT2BQ96GJ1 504 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SUCNR1Q9BXA5 334 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 C1QTNF6Q9BXI9 259 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SIRT5Q9NXA8 310 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ETV7Q9Y603 341 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 NQO2P16083 231 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 IDSP22304 550 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GLP1RP43220 463 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 LIMS1P48059 325 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF140P52738 457 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 TBPL1P62380 186 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 GAB1Q13480 694 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF124Q15973 351 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 CLEC9AQ6UXN8 241 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 MRPL41Q8IXM3 137 aaKnown RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 HORMAD2Q8N7B1 307 aa5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SAT2Q96F10 170 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SLC25A21Q9BQT8 299 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-213ENST00000537002 SLCO5A1Q9H2Y9 848 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms