RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 MSX2P35548 267 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RASGEF1BQ0VAM2 473 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FXNQ16595 210 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GLYATQ6IB77 296 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DHRS4L2Q6PKH6 230 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FAM162AQ96A26 154 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DNAJA3Q96EY1 480 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF300Q96RE9 604 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 OR11A1Q9GZK7 315 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CXXC4Q9H2H0 198 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 LRMDAQ9H2I8 198 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 OSGIN1Q9UJX0 560 aa15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SPIN1Q9Y657 262 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TMED7-TICAM2A0A0A6YYA0 188 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CFAP73A6NFT4 308 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GSC2O15499 205 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FESP07332 822 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GKN3PP0CG01 181 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TFPIP10646 304 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 NCK1P16333 377 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PSMB1P20618 241 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 HTR3AP46098 478 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 NCALDP61601 193 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CSNK2A1P68400 391 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF440Q8IYI8 595 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GABRG1Q8N1C3 465 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CLIP4Q8N3C7 705 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CLPTM1LQ96KA5 538 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FOXC2Q99958 501 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ADPRHL2Q9NX46 363 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 BAG5Q9UL15 447 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TMED7Q9Y3B3 224 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SNX13Q9Y5W8 968 aa15.86■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TMEM72A0PK05 275 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TPST1O60507 370 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PMS2P2O95744 297 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 UQCRBP14927 111 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CCNA2P20248 432 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DNASE1P24855 282 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FKBP2P26885 142 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 LOXP28300 417 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TACR3P29371 465 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ACAA2P42765 397 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SLC1A3P43003 542 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CRYBA2P53672 197 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 DUSP7Q16829 419 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CYBRD1Q53TN4 286 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ABLIM2Q6H8Q1 611 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 LZICQ8WZA0 190 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CCDC124Q96CT7 223 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TACO1Q9BSH4 297 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CADM1Q9BY67 442 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ADAM19Q9H013 955 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PCDHAC1Q9H158 963 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MUC13Q9H3R2 512 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 FANCFQ9NPI8 374 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 HDGFL3Q9Y3E1 203 aa15.85■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF814B7Z6K7 855 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ATE1O95260 518 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 STAMBPO95630 424 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RAF1P04049 648 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 C8BP07358 591 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PPP3CBP16298 524 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 EDNRAP25101 427 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CLK1P49759 484 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 POLR2HP52434 150 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TRIM25Q14258 630 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CXorf67Q86X51 503 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PROX1Q92786 737 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SLC35B4Q969S0 331 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF775Q96BV0 537 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 PIK3IP1Q96FE7 263 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 NSMCE2Q96MF7 247 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 HS3ST6Q96QI5 342 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RSPO3Q9BXY4 272 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ACTR6Q9GZN1 396 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MMADHCQ9H3L0 296 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 EVA1AQ9H8M9 152 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GORASP2Q9H8Y8 452 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 RPS6KA6Q9UK32 745 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 EDARQ9UNE0 448 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GPR52Q9Y2T5 361 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MTORP42345 2549 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZC3H12DA2A288 527 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF716A6NP11 495 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF724A8MTY0 619 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ARPC2O15144 300 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ZNF208O43345 1280 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SERPINA1P01009 418 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 CD247P20963 164 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 OR3A2P47893 321 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 SELENOWP63302 87 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 GLIPR1L2Q4G1C9 344 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 YTHDF3Q7Z739 585 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 MBD6Q96DN6 1003 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ASB9Q96DX5 294 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 TPD52L3Q96J77 140 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 OR10A4Q9H209 315 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 ACTR3BQ9P1U1 418 aa15.84■□□□□ 0.13
TNFRSF1A-209ENST00000536717 IGKV3D-15A0A087WSY6 115 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms