RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 MSX2P35548 267 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 CTBP2P56545 445 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 TRIM25Q14258 630 aaKnown RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 MFSD13AQ14CX5 517 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 TTC33Q6PID6 262 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 CYP4Z1Q86W10 505 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 DHFR2Q86XF0 187 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 CNEP1R1Q8N9A8 125 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 PIGXQ8TBF5 258 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 ROBO4Q8WZ75 1007 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 SLC7A6OSQ96CW6 309 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 SLC41A3Q96GZ6 507 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 PRRC1Q96M27 445 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 TMEM43Q9BTV4 400 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 PIGMQ9H3S5 423 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 KCNN3Q9UGI6 736 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 SLC7A7Q9UM01 511 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 FAM32AQ9Y421 112 aaKnown RBP12.08□□□□□ -0.48
RPAIN-205ENST00000536255 TEX15Q9BXT5 2789 aa12.08□□□□□ -0.48
RPAIN-205ENST00000536255 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 CYTIPO60759 359 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 PDE5AO76074 875 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 IMPDH2P12268 514 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 ITGA2P17301 1181 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 FPR1P21462 350 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 PEX19P40855 299 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 EGR4Q05215 589 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 RASGEF1BQ0VAM2 473 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 ST3GAL3Q11203 375 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 PIN1Q13526 163 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-205ENST00000536255 OR7A5Q15622 319 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 TMEM201Q5SNT2 666 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 FAM69AQ5T7M9 428 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 PAQR6Q6TCH4 344 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 DCHS2Q6V1P9 2916 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 CCDC121Q6ZUS5 278 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 FAM214BQ7L5A3 538 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 OR6S1Q8NH40 331 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 CCDC124Q96CT7 223 aaKnown RBP12.07□□□□□ -0.48
RPAIN-205ENST00000536255 ASB9Q96DX5 294 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 PYURFQ96I23 114 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 SLC19A3Q9BZV2 496 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 TRIM15Q9C019 465 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 AMBRA1Q9C0C7 1298 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 EMC3Q9P0I2 261 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 RIMS3Q9UJD0 308 aa12.07□□□□□ -0.48
RPAIN-205ENST00000536255 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 IGHV3-15A0A0B4J1V0 119 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 EBAG9O00559 213 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 SMAD9O15198 467 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 SS18L1O75177 396 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 RBM34P42696 430 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 KIR2DL2P43627 348 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 RPS5P46782 204 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 SIRPAP78324 504 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 H3F3AP84243 136 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 TLE4Q04727 773 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 TRAP1Q12931 704 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 SNTB1Q13884 538 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 PDK3Q15120 406 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 GUSBP1Q15486 140 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 ABLIM2Q6H8Q1 611 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 LCN8Q6JVE9 175 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 VWA1Q6PCB0 445 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 CYP2R1Q6VVX0 501 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 LINC00114Q6XXX2 140 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 KIF18BQ86Y91 864 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 ABHD3Q8WU67 409 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 SLC25A36Q96CQ1 311 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 KTI12Q96EK9 354 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 DNAJA3Q96EY1 480 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 HS6ST2Q96MM7 605 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 RBM24Q9BX46 236 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 BCO1Q9HAY6 547 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 C6orf203Q9P0P8 240 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 KLHL13Q9P2N7 655 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 ENPP4Q9Y6X5 453 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 APCP25054 2843 aa12.06□□□□□ -0.48
RPAIN-205ENST00000536255 INTS1Q8N201 2190 aaKnown RBP12.06□□□□□ -0.48
RPAIN-205ENST00000536255 CACNA1DQ01668 2161 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 IGKV1D-42A0A075B6H8 117 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 AQP7P3A6NL99 342 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 ZNF724A8MTY0 619 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 GPR171O14626 319 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 MSTNO14793 375 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 SMNDC1O75940 238 aaKnown RBP eCLIP12.05□□□□□ -0.48
RPAIN-205ENST00000536255 VAMP5O95183 116 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 MT-ATP6P00846 226 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 YES1P07947 543 aa12.05□□□□□ -0.48
RPAIN-205ENST00000536255 RHCEP18577 417 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms