RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 AK6Q9Y3D8 172 aaKnown RBP14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 COL4A2P08572 1712 aa14.69□□□□□ -0.06
CHMP1A-202ENST00000535997 TEX13CA0A0J9YWL9 993 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 OR6C68A6NDL8 312 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 C10orf142B7Z368 130 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 FOXS1O43638 330 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 SPI1P17947 270 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 GIFP27352 417 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 HTR2BP41595 481 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 DGCR2P98153 550 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 DYRK1AQ13627 763 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 HTR4Q13639 388 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 DEFB110Q30KQ9 67 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF542PQ5EBM4 170 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 CD276Q5ZPR3 534 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 SNAPC3Q92966 411 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 NECTIN4Q96NY8 510 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 DGAT2Q96PD7 388 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 CCNL2Q96S94 520 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 PDCD1LG2Q9BQ51 273 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 RBCK1Q9BYM8 510 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 ACTR6Q9GZN1 396 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 EMC7Q9NPA0 242 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 PIAS3Q9Y6X2 628 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 HEATR5AQ86XA9 2040 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 SPTY2D1-AS1A0A0U1RR47 76 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 TCRBV21S2A2A0A5A6 115 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 CELA2BP08218 269 aaPredicted RBP14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 GABRG2P18507 467 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 RPS4XP62701 263 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 EIF2B5Q13144 721 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 SNTB2Q13425 540 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 BCORP1Q8N888 145 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 C19orf47Q8N9M1 422 aaKnown RBP14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 RPLP0P6Q8NHW5 317 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF671Q8TAW3 534 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNRF4Q8WWF5 429 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 PHF21AQ96BD5 680 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 HSPA12BQ96MM6 686 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 PRTFDC1Q9NRG1 225 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 HCN3Q9P1Z3 774 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 OR10H1Q9Y4A9 318 aa14.68□□□□□ -0.06
CHMP1A-202ENST00000535997 A0A0B4J203 849 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 TRABD2BA6NFA1 517 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 OR7A10O76100 309 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 CTSEP14091 401 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 SNRPD2P62316 118 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 FUT7Q11130 342 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 UBE2NLQ5JXB2 153 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF440Q8IYI8 595 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 OR7G1Q8NGA0 311 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 C16orf52Q8NHV5 167 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 RPS4Y2Q8TD47 263 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 ADAMTS18Q8TE60 1221 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 C3orf49Q96BT1 292 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 GPX7Q96SL4 187 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 OR10A5Q9H207 317 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 OR51J1Q9H342 316 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 PCDHGA9Q9Y5G4 932 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 SZT2Q5T011 3432 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 PDCD5O14737 125 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF749O43361 778 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 CDC123O75794 336 aaPredicted RBP14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 GLCEO94923 617 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 IGF2P01344 180 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 IGHV4-34P06331 123 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 GPLD1P80108 840 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 CDH24Q86UP0 819 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 C9orf62Q8N4C0 152 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 OR6K6Q8NGW6 343 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 SMIM4Q8WVI0 70 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 NKX2-4Q9H2Z4 354 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 CCDC86Q9H6F5 360 aaKnown RBP14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 PTTG3PQ9NZH4 202 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 COPS3Q9UNS2 423 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF281Q9Y2X9 895 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 CLDN16Q9Y5I7 305 aa14.67□□□□□ -0.06
CHMP1A-202ENST00000535997 SPTBP11277 2137 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 SELENOFO60613 162 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 ERVK-25P63136 954 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 BTG2P78543 158 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 SRSF5Q13243 272 aaKnown RBP14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 NDUFAF6Q330K2 333 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 KLHL26Q53HC5 615 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 ZNF782Q6ZMW2 699 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 NANOGNBQ7Z5D8 188 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 KCTD20Q7Z5Y7 419 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 AVL9Q8NBF6 648 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 OR11H7Q8NGC8 314 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 NOX4Q9NPH5 578 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 UCKL1Q9NWZ5 548 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 AKAP7Q9P0M2 348 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 ERVH48-1M5A8F1 160 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 PNMTP11086 282 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 KLF9Q13886 244 aaPredicted RBP14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 FZD2Q14332 565 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 GSG1Q2KHT4 349 aa14.66□□□□□ -0.06
CHMP1A-202ENST00000535997 COL13A1Q5TAT6 717 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms