RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ELOVL5Q9NYP7 299 aa7.65□□□□□ -1.18
SFSWAP-202ENST00000535202 MCTS1Q9ULC4 181 aaKnown RBP7.65□□□□□ -1.18
SFSWAP-202ENST00000535202 EMC9Q9Y3B6 208 aa7.65□□□□□ -1.18
SFSWAP-202ENST00000535202 RAP2CQ9Y3L5 183 aa7.65□□□□□ -1.18
SFSWAP-202ENST00000535202 CORINQ9Y5Q5 1042 aa7.65□□□□□ -1.18
SFSWAP-202ENST00000535202 SPG11Q96JI7 2443 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 AKAP6Q13023 2319 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 PRRC2AP48634 2157 aaKnown RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 A0A0J9YW62 118 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 C16orf97H3BN30 126 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 J3QRK9 145 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 RNASET2O00584 256 aaKnown RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 SOX30O94993 753 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 CPSF4O95639 269 aaKnown RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 KRT8P05787 483 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 FCGR1AP12314 374 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ELK4P28324 431 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 SHC1P29353 583 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 RCVRNP35243 200 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 EIF1P41567 113 aaKnown RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 P2RX1P51575 399 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 CCR4P51679 360 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ATP12AP54707 1039 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 CASP9P55211 416 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 SUMO3P55854 103 aaPredicted RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 C21orf58P58505 322 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 GABARAPL2P60520 117 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 PPP2R2BQ00005 443 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 GUSBP1Q15486 140 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 GPR68Q15743 365 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 NPTX1Q15818 432 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 FXNQ16595 210 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF181Q2M3W8 571 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 SMU1Q2TAY7 513 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 DEFB113Q30KQ7 82 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 SLC36A3Q495N2 470 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 CCDC58Q4VC31 144 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 KLHL26Q53HC5 615 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 GTF2IRD2BQ6EKJ0 949 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 CBLN3Q6UW01 205 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 HACD2Q6Y1H2 254 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ZBTB49Q6ZSB9 765 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 FKBP9P1Q75LS8 142 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 OLIG3Q7RTU3 272 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 PRSS48Q7RTY5 328 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 C6orf120Q7Z4R8 191 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 GTF2IRD2Q86UP8 949 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ANKRD46Q86W74 232 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 MFSD4AQ8N468 514 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ATP6V1C2Q8NEY4 427 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 OR6K3Q8NGY3 331 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 CAPSLQ8WWF8 208 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ROBO4Q8WZ75 1007 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 MBD6Q96DN6 1003 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 PIK3IP1Q96FE7 263 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 GMPPAQ96IJ6 420 aaPredicted RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 EBF4Q9BQW3 602 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 TRAF4Q9BUZ4 470 aaPredicted RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 TMUB1Q9BVT8 246 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 SERHL2Q9H4I8 314 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF385DQ9H6B1 395 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 C12orf49Q9H741 205 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF226Q9NYT6 803 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 NUP50Q9UKX7 468 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 A3GALT2U3KPV4 340 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 TACC2O95359 2948 aa7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
SFSWAP-202ENST00000535202 DUXAA6NLW8 204 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 GJE1A6NN92 205 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 ADAMDEC1O15204 470 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 SIAH2O43255 324 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF264O43296 627 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 SS18L1O75177 396 aaPredicted RBP7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 STX11O75558 287 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CYP7B1O75881 506 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 AK1P00568 194 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 ZNF182P17025 639 aaPredicted RBP7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 LBPP18428 481 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 KLK2P20151 261 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CD247P20963 164 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CRYGSP22914 178 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 AGTR1P30556 359 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 IDUAP35475 653 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 OPRL1P41146 370 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 PPP5CP53041 499 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CARD18P57730 90 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CD300CQ08708 224 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 FOXD4Q12950 439 aaPredicted RBP7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CEACAM7Q14002 265 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 TRIM25Q14258 630 aaKnown RBP7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 CDK10Q15131 360 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 MAPRE2Q15555 327 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 TOMM34Q15785 309 aaPredicted RBP7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 RBM48Q5RL73 367 aaKnown RBP7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 PDZK1Q5T2W1 519 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 FAM122CQ6P4D5 195 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 KCTD8Q6ZWB6 473 aa7.63□□□□□ -1.19
SFSWAP-202ENST00000535202 USP51Q70EK9 711 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms