RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 IGLV3-32A0A0A0MS00 114 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 EIF4E2O60573 245 aaKnown RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 CSTAP01040 98 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 P04436 131 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ADORA3P0DMS8 318 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ANXA8P13928 327 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 CNR1P21554 472 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TNFSF10P50591 281 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ARG2P78540 354 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 C17orf67Q0P5P2 114 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ASAH1Q13510 395 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 CD226Q15762 336 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SMN1Q16637 294 aaKnown RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 FAM209AQ5JX71 171 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ARMC4Q5T2S8 1044 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SIGIRRQ6IA17 410 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SPINK14Q6IE38 97 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SLC25A25Q6KCM7 469 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 COMTD1Q86VU5 262 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 PSD4Q8NDX1 1056 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 EXTL1Q92935 676 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 HSH2DQ96JZ2 352 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TMEM246Q9BRR3 403 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SLC22A4Q9H015 551 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 QPCTLQ9NXS2 382 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 KLHL28Q9NXS3 571 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TUBD1Q9UJT1 453 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 POFUT2Q9Y2G5 429 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 LOC400499M0QZD8 3231 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 DSPP15924 2871 aaKnown RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ADAMDEC1O15204 470 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF264O43296 627 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SLC25A12O75746 678 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SP1P08047 785 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 UBL4AP11441 157 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 PIPP12273 146 aaPredicted RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 CD46P15529 392 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ERP29P30040 261 aaKnown RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 IL1RL1Q01638 556 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 CARTPTQ16568 116 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF605Q86T29 641 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 NOXA1Q86UR1 476 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF440Q8IYI8 595 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TCTE3Q8IZS6 198 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 STX19Q8N4C7 294 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 ZNF614Q8N883 585 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TOR1AIP2Q8NFQ8 470 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 PHOSPHO1Q8TCT1 267 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 CNOT9Q92600 299 aaKnown RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 GGHQ92820 318 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SCMH1Q96GD3 660 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TPD52L3Q96J77 140 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 RNF170Q96K19 258 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 LAT2Q9GZY6 243 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SMURF1Q9HCE7 757 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 RLIMQ9NVW2 624 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 DNAJB12Q9NXW2 375 aaKnown RBP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 KLRF1Q9NZS2 232 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 SLC13A4Q9UKG4 626 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 TBC1D24Q9ULP9 559 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCARB1-204ENST00000535005 WIF1Q9Y5W5 379 aa11.19□□□□□ -0.62
SCARB1-204ENST00000535005 PKD1L2Q7Z442 2459 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 GTPBP1O00178 669 aaKnown RBP11.18□□□□□ -0.62
SCARB1-204ENST00000535005 SEC14L5O43304 696 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 NME2P1O60361 137 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 F10P00742 488 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 IL7P13232 177 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 NME2P22392 152 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 MSX1P28360 303 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 SCN1BQ07699 218 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 PPP1R8Q12972 351 aaKnown RBP11.18□□□□□ -0.62
SCARB1-204ENST00000535005 SKP2Q13309 424 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 LINC00303Q3SY05 128 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 BICRALQ6AI39 1079 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 VTCN1Q7Z7D3 282 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 PLCZ1Q86YW0 608 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 ZADH2Q8N4Q0 377 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 OR10Q1Q8NGQ4 319 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 DUSP19Q8WTR2 217 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 GEMIN6Q8WXD5 167 aaKnown RBP11.18□□□□□ -0.62
SCARB1-204ENST00000535005 TMEM41AQ96HV5 264 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 C7orf34Q96L11 122 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 BARD1Q99728 777 aaKnown RBP11.18□□□□□ -0.62
SCARB1-204ENST00000535005 NIPAL2Q9H841 368 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 RASSF1Q9NS23 344 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 KLHL21Q9UJP4 597 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 SLC9A8Q9Y2E8 581 aa11.18□□□□□ -0.62
SCARB1-204ENST00000535005 KLF13Q9Y2Y9 288 aaPredicted RBP11.18□□□□□ -0.62
SCARB1-204ENST00000535005 LAMA5O15230 3695 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 CCRL2O00421 344 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 ARHGEF9O43307 516 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 OIP5O43482 229 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 CRYZL1O95825 349 aa11.17□□□□□ -0.62
SCARB1-204ENST00000535005 HLA-DMAP28067 261 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms