RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 GOLGA8RI6L899 631 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 KPNA4O00629 521 aaPredicted RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 SOCS3O14543 225 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TRDMT1O14717 391 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 YKT6O15498 198 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 COCHO43405 550 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TYROBPO43914 113 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SNAP91O60641 907 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 CEACAM4O75871 244 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 OR6A2O95222 327 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 STAMBPO95630 424 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 UGT2B4P06133 528 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 DCNP07585 359 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 PLEKP08567 350 aaPredicted RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 GZMAP12544 262 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TNNI3P19429 210 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 LHCGRP22888 699 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 IVDP26440 423 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ADORA2BP29275 332 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 RCVRNP35243 200 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 CETN2P41208 172 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 NBL1P41271 181 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TSFMP43897 325 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 RPS9P46781 194 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 HCAR3P49019 387 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 RGS7P49802 495 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 MFAP3P55082 362 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ATP5IP56385 69 aaPredicted RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 MAP3K7CLP57077 242 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 CSNK2BP67870 215 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 IRX4P78413 519 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 DLK1P80370 383 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 S100A12P80511 92 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 RAD51Q06609 339 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 LCP2Q13094 533 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SRSF9Q13242 221 aaKnown RBP eCLIP2.88□□□□□ -1.95
USP48-215ENST00000534705 NFATC2Q13469 925 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 RUNX3Q13761 415 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 PDE7AQ13946 482 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 POU6F1Q14863 301 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 C16orf72Q14CZ0 275 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 PON2Q15165 354 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ANGPT1Q15389 498 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ZBED5Q49AG3 693 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 HSP90AA4PQ58FG1 418 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 PM20D1Q6GTS8 502 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ANKRD26P1Q6NSI1 321 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 PODNL1Q6PEZ8 512 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 LCLAT1Q6UWP7 414 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 DLEU7Q6UYE1 221 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ZNF600Q6ZNG1 722 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 Q6ZS52 159 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 LRRC70Q7Z2Q7 622 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 NRARPQ7Z6K4 114 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 CARM1Q86X55 608 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ZCCHC7Q8N3Z6 543 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 TRIML2Q8N7C3 387 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 CLEC1AQ8NC01 280 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 OR56B1Q8NGI3 324 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 LHFPL5Q8TAF8 219 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 NDRG1Q92597 394 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 MRPS31Q92665 395 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 FBXO32Q969P5 355 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 PDXPQ96GD0 296 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 BTN2A3PQ96KV6 586 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TTC25Q96NG3 672 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 OPALINQ96PE5 141 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 VPS35Q96QK1 796 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SECISBP2Q96T21 854 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 SORT1Q99523 831 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 TSG101Q99816 390 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SPAG8Q99932 426 aaPredicted RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 SELENOSQ9BQE4 189 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ATG101Q9BSB4 218 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 FICDQ9BVA6 458 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 DUSP16Q9BY84 665 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 PRRG4Q9BZD6 226 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 GANQ9H2C0 597 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ARMC7Q9H6L4 198 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 GORASP2Q9H8Y8 452 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ACP6Q9NPH0 428 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 ZCCHC3Q9NUD5 404 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 TEX10Q9NXF1 929 aaPredicted RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 ATPIF1Q9UII2 106 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 KLK13Q9UKR3 277 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SCML2Q9UQR0 700 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 FOXA2Q9Y261 457 aaPredicted RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 EIF3LQ9Y262 564 aaKnown RBP2.88□□□□□ -1.95
USP48-215ENST00000534705 RNF11Q9Y3C5 154 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 MAD1L1Q9Y6D9 718 aa2.88□□□□□ -1.95
USP48-215ENST00000534705 SNRNP200O75643 2136 aaKnown RBP2.87□□□□□ -1.95
USP48-215ENST00000534705 UNC13CQ8NB66 2214 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 AKAP13Q12802 2813 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TRAV19A0A0A6YYK7 116 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 TRBV5-5A0A0J9YX44 114 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 LINC00854A0A1B0GVQ3 168 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 FAM47DPA6NHR8 397 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 YJEFN3A6XGL0 299 aa2.87□□□□□ -1.95
USP48-215ENST00000534705 EPM2AB3EWF7 344 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms