RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 IFT52Q9Y366 437 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 CHST2Q9Y4C5 530 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 PCDHB14Q9Y5E9 798 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 USH1CQ9Y6N9 552 aa7.83□□□□□ -1.16
COPB1-211ENST00000534234 NUP214P35658 2090 aaPredicted RBP7.82□□□□□ -1.16
COPB1-211ENST00000534234 NAV3Q8IVL0 2385 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 ARID1AO14497 2285 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 AQP7P3A6NL99 342 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 E7EQL1 145 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 M0R1B8 84 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 CLIC1O00299 241 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 NUDT7P0C024 238 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 CDH2P19022 906 aaPredicted RBP7.82□□□□□ -1.16
COPB1-211ENST00000534234 ZNF311Q5JNZ3 666 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 RNF220Q5VTB9 566 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 SLC2A7Q6PXP3 512 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 SERPINA11Q86U17 422 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 GPAT4Q86UL3 456 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 PRIMA1Q86XR5 153 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 OR9K2Q8NGE7 335 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 TMEM45BQ96B21 275 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 DHRS9Q9BPW9 319 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 SPATA9Q9BWV2 254 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 AMBRA1Q9C0C7 1298 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 PAIP1Q9H074 479 aaKnown RBP7.82□□□□□ -1.16
COPB1-211ENST00000534234 RAD21L1Q9H4I0 556 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 BARX1Q9HBU1 254 aaPredicted RBP7.82□□□□□ -1.16
COPB1-211ENST00000534234 BCL2L10Q9HD36 194 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 ABCA2Q9BZC7 2435 aa7.82□□□□□ -1.16
COPB1-211ENST00000534234 A0A096LPI6 279 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 SSX4O60224 188 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 KRT33AO76009 404 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 VAMP5O95183 116 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 TGDSO95455 350 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 MPGP29372 298 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 FABP6P51161 128 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 PRPS1P60891 318 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 STX1BP61266 288 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 HOXC5Q00444 222 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 SPOCK1Q08629 439 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 FADDQ13158 208 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 NRF1Q16656 503 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 C1orf140Q5VVS0 124 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 DNM1P46Q6ZS02 220 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 FBXL14Q8N1E6 418 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 MUC15Q8N387 334 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 C17orf78Q8N4C9 275 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 POMGNT2Q8NAT1 580 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 C1orf162Q8NEQ5 155 aaPredicted RBP7.81□□□□□ -1.16
COPB1-211ENST00000534234 MAL2Q969L2 176 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 C3orf49Q96BT1 292 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 ADAD1Q96M93 576 aaKnown RBP7.81□□□□□ -1.16
COPB1-211ENST00000534234 C7orf26Q96N11 449 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 CACNG6Q9BXT2 260 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 PIF1Q9H611 641 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 TCF7L2Q9NQB0 619 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 SLC17A5Q9NRA2 495 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 CBLN4Q9NTU7 201 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 AMDHD2Q9Y303 409 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 DSCAMO60469 2012 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 USF3Q68DE3 2245 aa7.81□□□□□ -1.16
COPB1-211ENST00000534234 RAI1Q7Z5J4 1906 aaPredicted RBP7.81□□□□□ -1.16
COPB1-211ENST00000534234 FN1P02751 2386 aaKnown RBP7.81□□□□□ -1.16
COPB1-211ENST00000534234 C5orf58C9J3I9 102 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 POLR3GO15318 223 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 FRS3O43559 492 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 NPIPB7O75200 414 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 AHSA1O95433 338 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 WNT11O96014 354 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 TP53P04637 393 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 BMP2P12643 396 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 IDH3AP50213 366 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 P2RY4P51582 365 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 IRX1P78414 480 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 SLC25A3Q00325 362 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 KRTAP1-1Q07627 177 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 RAB35Q15286 201 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 HIKESHIQ53FT3 197 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 C1QTNF12Q5T7M4 302 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 AGBL2Q5U5Z8 902 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 PRAMEF8Q5VWM4 474 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 PRAMEF7Q5VXH5 474 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 ZNF544Q6NX49 715 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 BLOC1S3Q6QNY0 202 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 CREB3L2Q70SY1 520 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 ABHD12BQ7Z5M8 362 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 FUNDC1Q8IVP5 155 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 GOLGA6L1Q8N7Z2 621 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 STK35Q8TDR2 534 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 LRRC8CQ8TDW0 803 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 SLC35B4Q969S0 331 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 SLC25A36Q96CQ1 311 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 EBF4Q9BQW3 602 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 RHNO1Q9BSD3 238 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 FKRPQ9H9S5 495 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 A4GALTQ9NPC4 353 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 SLCO1B3Q9NPD5 702 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 TMEM45AQ9NWC5 275 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 SLC25A37Q9NYZ2 338 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 SLAMF8Q9P0V8 285 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms