RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 CASP12Q6UXS9 341 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 MSANTD1Q6ZTZ1 278 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 YTHDF3Q7Z739 585 aaKnown RBP8.46□□□□□ -1.06
SSBP3-215ENST00000533946 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 STK32CQ86UX6 486 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 CMIPQ8IY22 773 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 KIRREL3Q8IZU9 778 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 STEAP2Q8NFT2 490 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 OR9K2Q8NGE7 335 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 SLC25A36Q96CQ1 311 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 TMEM120AQ9BXJ8 343 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 TRIM2Q9C040 744 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 RMND5AQ9H871 391 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 B3GAT1Q9P2W7 334 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-215ENST00000533946 TRAPPC4Q9Y296 219 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 HDGFL3Q9Y3E1 203 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 SLC25A15Q9Y619 301 aa8.46□□□□□ -1.06
SSBP3-215ENST00000533946 A0A1W2PP18 115 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 AQP7P3A6NL99 342 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 FXYD1O00168 92 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF208O43345 1280 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SHOX2O60902 331 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SMPD2O60906 423 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SEC14L2O76054 403 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 LY6HO94772 140 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 LGI1O95970 557 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 THBS1P07996 1170 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 GPX2P18283 190 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 IDUAP35475 653 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 CSNK2A1P68400 391 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SLC35A1P78382 337 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SCARB2Q14108 478 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SQLEQ14534 574 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 PPA1Q15181 289 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 RABL3Q5HYI8 236 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 WBP2NLQ6ICG8 309 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 NHLRC1Q6VVB1 395 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 CREB3L2Q70SY1 520 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 GPAT4Q86UL3 456 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 GOLGA6L1Q8N7Z2 621 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 SLC25A43Q8WUT9 341 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-215ENST00000533946 GTPBP3Q969Y2 492 aaKnown RBP8.45□□□□□ -1.06
SSBP3-215ENST00000533946 APH1AQ96BI3 265 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 TAMM41Q96BW9 452 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 POM121Q96HA1 1249 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 TXNDC15Q96J42 360 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 MOGAT1Q96PD6 335 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 NELFAQ9H3P2 528 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 VIPAS39Q9H9C1 493 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 GP6Q9HCN6 339 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 FGFR1OP2Q9NVK5 253 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 BEX4Q9NWD9 120 aaPredicted RBP8.45□□□□□ -1.06
SSBP3-215ENST00000533946 RNF115Q9Y4L5 304 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 RTTNQ86VV8 2226 aa8.45□□□□□ -1.06
SSBP3-215ENST00000533946 ARFGEF3Q5TH69 2177 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 A0A096LPE4 126 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 A0A1W2PPZ6 126 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 OR5H1A6NKK0 313 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 CCT8L1PA6NM43 557 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 MS4A18H0YCH9 400 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 OVOL3O00110 214 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 ABCD4O14678 606 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 MRPL33O75394 65 aaKnown RBP8.44□□□□□ -1.06
SSBP3-215ENST00000533946 MFN2O95140 757 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 IGHV4-39P01824 125 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 CELA3BP08861 270 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 PNMTP11086 282 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 PPP3CBP16298 524 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 GGT1P19440 569 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 CD247P20963 164 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 ATP4BP51164 291 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 CDH12P55289 794 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 PCBP3P57721 371 aaKnown RBP8.44□□□□□ -1.06
SSBP3-215ENST00000533946 STX1BP61266 288 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
SSBP3-215ENST00000533946 LRRC74AQ0VAA2 488 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 TNK1Q13470 666 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 LARS2Q15031 903 aaKnown RBP8.44□□□□□ -1.06
SSBP3-215ENST00000533946 PDK3Q15120 406 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 MS4A18Q3C1V0 323 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF672Q499Z4 452 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-215ENST00000533946 PAQR6Q6TCH4 344 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 DHDDSQ86SQ9 333 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF611Q8N823 705 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 BBS10Q8TAM1 723 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 PIGXQ8TBF5 258 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 HSD17B8Q92506 261 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 DDIT4LQ96D03 193 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 ANKRD27Q96NW4 1050 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 MUS81Q96NY9 551 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 CGREF1Q99674 301 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 POTEKPQ9BYX7 375 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 HHATLQ9HCP6 504 aa8.44□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF701Q9NV72 531 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-215ENST00000533946 YLPM1P49750 1951 aaKnown RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 CIB4A0PJX0 185 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 A8MVM7 634 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms