RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SCGB1D2O95969 90 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 AMY2AP04746 511 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 SNU13P55769 128 aaKnown RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 ADGRF3Q8IZF5 1079 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 SNAPC3Q92966 411 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 INTS14Q96SY0 518 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 ALG12Q9BV10 488 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 HS3ST3A1Q9Y663 406 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 V9GY05 133 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 SERINC4A6NH21 518 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 P04436 131 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 CELA2BP08218 269 aaPredicted RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 NID1P14543 1247 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 PPP1CAP62136 330 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 POU3F1Q03052 451 aaPredicted RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 AGERQ15109 404 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 RAB11BQ15907 218 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 OCLNQ16625 522 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 FAM27D1Q5T7N8 215 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 VASNQ6EMK4 673 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 PAPD4Q6PIY7 484 aaKnown RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 LRRC28Q86X40 367 aaPredicted RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 LINC00615Q96LM1 132 aaPredicted RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 HYLS1Q96M11 299 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 FYTTD1Q96QD9 318 aaKnown RBP11.47□□□□□ -0.57
RAD50-209ENST00000533482 TEAD3Q99594 435 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 C19orf43Q9BQ61 176 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 SYT4Q9H2B2 425 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 OR51J1Q9H342 316 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 FKBP14Q9NWM8 211 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 ZNF337Q9Y3M9 751 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 MAB21L2Q9Y586 359 aa11.47□□□□□ -0.57
RAD50-209ENST00000533482 A0A1W2PS29 197 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 TLCD2A6NGC4 264 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 SLC35E2P0CK97 266 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 SIRPAP78324 504 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 CD300CQ08708 224 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 EIF2B1Q14232 305 aaKnown RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 LRRN1Q6UXK5 716 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 CLDN22Q8N7P3 220 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 THAP6Q8TBB0 222 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 TSLPQ969D9 159 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 KIAA1143Q96AT1 154 aaPredicted RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 FAM71F1Q96KD3 344 aaPredicted RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 SLC38A1Q9H2H9 487 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 RANBP3Q9H6Z4 567 aaPredicted RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 GALNT9Q9HCQ5 603 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 A0A0X1KG70 313 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 A0A1W2PPC4 97 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 WRBO00258 174 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 CTNSO60931 367 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 SYPP08247 313 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 SFXN4Q6P4A7 337 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 RNF113BQ8IZP6 322 aaKnown RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 OR5J2Q8NH18 312 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 POTEKPQ9BYX7 375 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 ULBP3Q9BZM4 244 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 NT5DC2Q9H857 520 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 OR2S2Q9NQN1 319 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 ZNF701Q9NV72 531 aaPredicted RBP11.46□□□□□ -0.57
RAD50-209ENST00000533482 SLC6A14Q9UN76 642 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 ALG5Q9Y673 324 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 PIKFYVEQ9Y2I7 2098 aa11.46□□□□□ -0.57
RAD50-209ENST00000533482 DOCK6Q96HP0 2047 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 A0A0G2JMP0 313 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 EFCAB7A8K855 629 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 F5H5K5 113 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 ARPC5O15511 151 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 ZNF208O43345 1280 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 HRO43593 1189 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 HCRTR1O43613 425 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 APEHP13798 732 aaKnown RBP11.46□□□□□ -0.58
RAD50-209ENST00000533482 PRSS3P35030 304 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 ARPC4P59998 168 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SF3B4Q15427 424 aaKnown RBP eCLIP11.46□□□□□ -0.58
RAD50-209ENST00000533482 SLC22A10Q63ZE4 541 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 ZNF620Q6ZNG0 422 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SLC16A12Q6ZSM3 486 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 PRSS45Q7RTY3 260 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SFTPA2Q8IWL1 248 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 ELMOD2Q8IZ81 293 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 OR4M2Q8NGB6 313 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 ZNF717Q9BY31 904 aaPredicted RBP11.46□□□□□ -0.58
RAD50-209ENST00000533482 ELOVL3Q9HB03 270 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 FBXO8Q9NRD0 319 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SLC17A4Q9Y2C5 497 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SDK2Q58EX2 2172 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 TRBV5-3A0A0A0MS03 114 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 AGAP14A8MT82 685 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 CTSVO60911 334 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 CBX5P45973 191 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 MRPL19P49406 292 aaKnown RBP11.46□□□□□ -0.58
RAD50-209ENST00000533482 SPOCK1Q08629 439 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 C14orf28Q4W4Y0 310 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SLC6A19Q695T7 634 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 WBP2NLQ6ICG8 309 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.58
RAD50-209ENST00000533482 SIMC1Q8NDZ2 872 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms