RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C3orf49Q96BT1 292 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 FRMD6Q96NE9 622 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 HES7Q9BYE0 225 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 OR52D1Q9H346 318 aa16.77■□□□□ 0.27
SMPD1-208ENST00000533123 DSPP15924 2871 aaKnown RBP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 TRAV27A0A087WT01 109 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 MRPS14O60783 128 aaKnown RBP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 MST1P26927 711 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 CTBP2P56545 445 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 ARG2P78540 354 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 CRYZQ08257 329 aaKnown RBP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 TMPRSS11FQ6ZWK6 438 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 SVOPQ8N4V2 548 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 ZNF563Q8TA94 476 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 JSRP1Q96MG2 331 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 HS6ST2Q96MM7 605 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 WARS2Q9UGM6 360 aaKnown RBP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 CDC40O60508 579 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 RBM34P42696 430 aaKnown RBP16.76■□□□□ 0.27
SMPD1-208ENST00000533123 SLC15A1P46059 708 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 SLC6A8P48029 635 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 CBFBQ13951 182 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 PGGHGQ32M88 737 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 FAM26EQ8N5C1 309 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 HAS2Q92819 552 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 DCUN1D5Q9BTE7 237 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 KLHL1Q9NR64 748 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 DEPPQ9NTK1 212 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 FBXL2Q9UKC9 423 aa16.76■□□□□ 0.27
SMPD1-208ENST00000533123 EFCAB9A8MZ26 197 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 H3BMQ9 156 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 PSMB9P28065 219 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 ZNF91Q05481 1191 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 OCLNQ16625 522 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 THSD4Q6ZMP0 1018 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 CDK20Q8IZL9 346 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 CLDN22Q8N7P3 220 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 OR51A7Q8NH64 312 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 TMEM163Q8TC26 289 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 NTNG2Q96CW9 530 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 Q96MT0 163 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 COG8Q96MW5 612 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 ZNF582Q96NG8 517 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-208ENST00000533123 GNRHR2Q96P88 292 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMPD1-208ENST00000533123 UBQLN3Q9H347 655 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 HHATLQ9HCP6 504 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 TMEM5Q9Y2B1 443 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 CSAG2Q9Y5P2 127 aa16.75■□□□□ 0.27
SMPD1-208ENST00000533123 A0A087WUJ7 227 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 EFCAB10A6NFE3 127 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 SNX4O95219 450 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 ATE1O95260 518 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 SLC2A10O95528 541 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 TMPRSS3P57727 454 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 ANKDD1AQ495B1 522 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 OR2T33Q8NG76 320 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 GPR119Q8TDV5 335 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 DNAJA4Q8WW22 397 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-208ENST00000533123 ZCCHC14Q8WYQ9 949 aaKnown RBP16.74■□□□□ 0.27
SMPD1-208ENST00000533123 SLC38A2Q96QD8 506 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 FUNDC2Q9BWH2 189 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 RNF32Q9H0A6 362 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 IGLV3-32A0A0A0MS00 114 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 LRRN3E7EW58 273 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 SURF4O15260 269 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 WISP1O95388 367 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 DBTP11182 482 aaKnown RBP16.74■□□□□ 0.27
SMPD1-208ENST00000533123 PGCP20142 388 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 NR4A1P22736 598 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 WBP2NLQ6ICG8 309 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 ARSKQ6UWY0 536 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 MDS2Q8NDY4 140 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 OR2M3Q8NG83 312 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 CNOT2Q9NZN8 540 aaKnown RBP16.74■□□□□ 0.27
SMPD1-208ENST00000533123 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMPD1-208ENST00000533123 VDAC3Q9Y277 283 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 SIGLEC7Q9Y286 467 aa16.74■□□□□ 0.27
SMPD1-208ENST00000533123 PRRC2CQ9Y520 2896 aaKnown RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 A0A087WV48 116 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 ANKUB1A6NFN9 424 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 PTHP01270 115 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 CNR1P21554 472 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 ACVR2AP27037 513 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 QPRTQ15274 297 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 TBCEQ15813 527 aaPredicted RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 SLC25A30Q5SVS4 291 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 SYT6Q5T7P8 510 aaPredicted RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 IGFL2Q6UWQ7 119 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 PLCZ1Q86YW0 608 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 OR4K17Q8NGC6 315 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 OR1J4Q8NGS1 313 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 ZNF420Q8TAQ5 688 aaPredicted RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 DOK1Q99704 481 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 TPRP12270 2363 aaKnown RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 TNRC6AQ8NDV7 1962 aaKnown RBP16.73■□□□□ 0.27
SMPD1-208ENST00000533123 IGKV1D-42A0A075B6H8 117 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 PINLYPA6NC86 204 aa16.73■□□□□ 0.27
SMPD1-208ENST00000533123 SNPHO15079 494 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms