RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 INTS11Q5TA45 600 aaKnown RBP13.61□□□□□ -0.23
CPSF1-210ENST00000532935 PATL1Q86TB9 770 aaKnown RBP13.61□□□□□ -0.23
CPSF1-210ENST00000532935 CALHM3Q86XJ0 350 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 LURAP1LQ8IV03 231 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 POU5F2Q8N7G0 328 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 TMEM99Q8N816 258 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 ELOA3Q8NG57 546 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 DNAJA4Q8WW22 397 aaPredicted RBP13.61□□□□□ -0.23
CPSF1-210ENST00000532935 WFDC6Q9BQY6 131 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 TAPBPLQ9BX59 468 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 ADPRHL2Q9NX46 363 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 ST6GALNAC2Q9UJ37 374 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 VPS13CQ709C8 3753 aa13.61□□□□□ -0.23
CPSF1-210ENST00000532935 A0A1W2PPR1 153 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 AQP7P3A6NL99 342 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 M0R3H8 397 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 TPST2O60704 377 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 AHSA1O95433 338 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 CNOT4O95628 575 aaKnown RBP13.6□□□□□ -0.23
CPSF1-210ENST00000532935 PNMTP11086 282 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 IL32P24001 234 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 NTF4P34130 210 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 EGR4Q05215 589 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 ITGADQ13349 1161 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 SLC17A1Q14916 467 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 ALG10BQ5I7T1 473 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 FAM91A1Q658Y4 838 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 ULK3Q6PHR2 472 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 RANBP3LQ86VV4 465 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-210ENST00000532935 GPR32P1Q8NGA4 272 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 RP9Q8TA86 221 aaKnown RBP13.6□□□□□ -0.23
CPSF1-210ENST00000532935 NINJ1Q92982 152 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-210ENST00000532935 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 TAMM41Q96BW9 452 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 RCN3Q96D15 328 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 PIK3IP1Q96FE7 263 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 ARHGDIGQ99819 225 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 TMEM27Q9HBJ8 222 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 EDARQ9UNE0 448 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 FLVCR1Q9Y5Y0 555 aa13.6□□□□□ -0.23
CPSF1-210ENST00000532935 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
CPSF1-210ENST00000532935 MRPL33O75394 65 aaKnown RBP13.59□□□□□ -0.23
CPSF1-210ENST00000532935 C8BP07358 591 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 COX4I1P13073 169 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 CD247P20963 164 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 P2RY4P51582 365 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 IST1P53990 364 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 OR1Q1Q15612 314 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 NRF1Q16656 503 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 PAMR1Q6UXH9 720 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 CCDC80Q76M96 950 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 BHLHA15Q7RTS1 189 aaPredicted RBP13.59□□□□□ -0.23
CPSF1-210ENST00000532935 WFDC8Q8IUA0 241 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 UBE2J2Q8N2K1 259 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 MFSD8Q8NHS3 518 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 SLC26A7Q8TE54 656 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 SLC38A4Q969I6 547 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 KTI12Q96EK9 354 aaPredicted RBP13.59□□□□□ -0.23
CPSF1-210ENST00000532935 SLC47A1Q96FL8 570 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 ZNF583Q96ND8 569 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 PTDSS2Q9BVG9 487 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 SF3B5Q9BWJ5 86 aaKnown RBP13.59□□□□□ -0.23
CPSF1-210ENST00000532935 SELENONQ9NZV5 590 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 USP22Q9UPT9 525 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 PLEKHA6Q9Y2H5 1048 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 ROS1P08922 2347 aa13.59□□□□□ -0.23
CPSF1-210ENST00000532935 DSCAMO60469 2012 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 IGKV1D-42A0A075B6H8 117 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 A0A0B4J2E0 115 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 A0A1B0GX12 115 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 FTCDNL1E5RQL4 147 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 KLF4O43474 513 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 FMO6PO60774 539 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 LYZL6O75951 148 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 COX5AP20674 150 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 IGHV1-2P23083 117 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 DNASE1P24855 282 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 LOXP28300 417 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-210ENST00000532935 RPS5P46782 204 aaKnown RBP13.58□□□□□ -0.24
CPSF1-210ENST00000532935 CRYBA2P53672 197 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 TESK1Q15569 626 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 NPTX1Q15818 432 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 BEX5Q5H9J7 111 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 TMEM225Q6GV28 225 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 C5orf46Q6UWT4 87 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 CASP12Q6UXS9 341 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 GPAT4Q86UL3 456 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 TREML1Q86YW5 311 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 OR6T1Q8NGN1 323 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 RNF217Q8TC41 542 aa13.58□□□□□ -0.24
CPSF1-210ENST00000532935 RASSF5Q8WWW0 418 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms