RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PMM1Q92871 262 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
SSH3-209ENST00000532600 CMTM6Q9NX76 183 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 NPAP1Q9NZP6 1156 aa16.72■□□□□ 0.27
SSH3-209ENST00000532600 CFAP73A6NFT4 308 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 TRIM64A6NGJ6 449 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 TRIM64BA6NI03 449 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 ZNF208O43345 1280 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 DNPH1O43598 174 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 PGM3O95394 542 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 IL7RP16871 459 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 NUDT2P50583 147 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 OR2B6P58173 313 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 BSPH1Q075Z2 132 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 KRT72Q14CN4 511 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 HACD2Q6Y1H2 254 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 ZNF433Q8N7K0 673 aaPredicted RBP16.71■□□□□ 0.27
SSH3-209ENST00000532600 OR52P1PQ8NH57 321 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 OR10A6Q8NH74 314 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 NFKBIDQ8NI38 313 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 PIF1Q9H611 641 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 TMEM38AQ9H6F2 299 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 EFCAB1Q9HAE3 211 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 GID8Q9NWU2 228 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 TMEM181Q9P2C4 612 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 TAGLN3Q9UI15 199 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 CORO2BQ9UQ03 480 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 TRAPPC4Q9Y296 219 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 RNF115Q9Y4L5 304 aa16.71■□□□□ 0.27
SSH3-209ENST00000532600 H7C1Q1 480 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 SOD3P08294 240 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 DANCRP0C864 163 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 T-ENOLP0DO92 83 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 PRG2P13727 222 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 FKBP2P26885 142 aaKnown RBP16.7■□□□□ 0.26
SSH3-209ENST00000532600 HTR3AP46098 478 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 KRTAP21-3Q3LHN1 58 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 FBXW9Q5XUX1 488 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 PEX5LQ8IYB4 626 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 ZNF100Q8IYN0 542 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 KBTBD8Q8NFY9 601 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 PIGXQ8TBF5 258 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 THUMPD1Q9NXG2 353 aaKnown RBP16.7■□□□□ 0.26
SSH3-209ENST00000532600 EMC3Q9P0I2 261 aa16.7■□□□□ 0.26
SSH3-209ENST00000532600 NOSIPQ9Y314 301 aaKnown RBP16.7■□□□□ 0.26
SSH3-209ENST00000532600 FN1P02751 2386 aaKnown RBP16.7■□□□□ 0.26
SSH3-209ENST00000532600 CCT8L1PA6NM43 557 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 OVOL3O00110 214 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 CLOCKO15516 846 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 CNOT4O95628 575 aaKnown RBP16.69■□□□□ 0.26
SSH3-209ENST00000532600 CDK6Q00534 326 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 PPA1Q15181 289 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 STK11Q15831 433 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 SLC15A3Q8IY34 581 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 TMEM171Q8WVE6 324 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 APH1AQ96BI3 265 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 ZNF583Q96ND8 569 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 TRIM2Q9C040 744 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 BCL2L10Q9HD36 194 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 LAMP3Q9UQV4 416 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 ZNF443Q9Y2A4 671 aaPredicted RBP16.69■□□□□ 0.26
SSH3-209ENST00000532600 FLVCR1Q9Y5Y0 555 aa16.69■□□□□ 0.26
SSH3-209ENST00000532600 PDLIM1O00151 329 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 NME4O00746 187 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 LY6G6DO95868 133 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 CD3EP07766 207 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 ITGA5P08648 1049 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 SLC7A2P52569 658 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 CRISP3P54108 245 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 SLC35A1P78382 337 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 LTBQ06643 244 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 BNIP2Q12982 314 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 SCARB2Q14108 478 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 GNA13Q14344 377 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 SLC17A1Q14916 467 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 CYP51A1Q16850 503 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 PGGHGQ32M88 737 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 ZNF672Q499Z4 452 aaPredicted RBP16.68■□□□□ 0.26
SSH3-209ENST00000532600 LIN52Q52LA3 116 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 TIMM23BQ5SRD1 257 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 RNF220Q5VTB9 566 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 SERPINA11Q86U17 422 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 DDIT4LQ96D03 193 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 ZHX1-C8orf76Q96EF9 292 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 USB1Q9BQ65 265 aaKnown RBP16.68■□□□□ 0.26
SSH3-209ENST00000532600 ESRP2Q9H6T0 727 aaKnown RBP16.68■□□□□ 0.26
SSH3-209ENST00000532600 MALT1Q9UDY8 824 aa16.68■□□□□ 0.26
SSH3-209ENST00000532600 A0A0G2JPF8 293 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 LIPT2A6NK58 231 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 OR5H1A6NKK0 313 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 HNRNPCL2B2RXH8 293 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 SHISA9B4DS77 424 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 HNRNPCL3B7ZW38 293 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 GPR171O14626 319 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 HNRNPCL1O60812 293 aaKnown RBP16.67■□□□□ 0.26
SSH3-209ENST00000532600 RAD51DO75771 328 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 HNRNPCL4P0DMR1 293 aa16.67■□□□□ 0.26
SSH3-209ENST00000532600 GGT1P19440 569 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms