RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RBFOX1Q9NWB1 397 aaKnown RBP14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 ARPC1BO15143 372 aaKnown RBP14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 PPM1DO15297 605 aa14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 DNAJB6O75190 326 aa14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 SQSTM1Q13501 440 aa14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 FGFBP1Q14512 234 aa14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 P2RY14Q15391 338 aa14.17□□□□□ -0.14
PCDHA3-202ENST00000532566 FUCA1P04066 466 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 SNRPBP14678 240 aaKnown RBP14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 FNTBP49356 437 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 AFF3P51826 1226 aaKnown RBP14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 CEBPGP53567 150 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 FGL1Q08830 312 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 DUSP8Q13202 625 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 GPR50Q13585 617 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 C1orf53Q5VUE5 145 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 FCRLAQ7L513 359 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 KIAA1958Q8N8K9 716 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 PRDM9Q9NQV7 894 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 SERTM1A2A2V5 107 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 H7C1C5 153 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 UPK1AO00322 258 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 ATF4P18848 351 aaPredicted RBP14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 MAKP20794 623 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 LCN6P62502 163 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 IL17RCQ8NAC3 791 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 OR7G1Q8NGA0 311 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 PFN4Q8NHR9 129 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 HINT3Q9NQE9 182 aaKnown RBP14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 FBXO8Q9NRD0 319 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 MYEF2Q9P2K5 600 aaKnown RBP14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 CEP290O15078 2479 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM269A0A1B0GVZ9 245 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 ARSBP15848 533 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 SLC2A5P22732 501 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 ETV5P41161 510 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 ETV1P50549 477 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 RAE1P78406 368 aaKnown RBP14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 C5orf46Q6UWT4 87 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 C7orf34Q96L11 122 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 RNF167Q9H6Y7 350 aa14.16□□□□□ -0.14
PCDHA3-202ENST00000532566 KDM4EB2RXH2 506 aaPredicted RBP14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 MPIG6BO95866 241 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 ST6GAL1P15907 406 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 FOLR3P41439 243 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 CASP3P42574 277 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TBC1D25Q3MII6 688 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 DPY19L4Q7Z388 723 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 CCDC28AQ8IWP9 274 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 RHNO1Q9BSD3 238 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TREM1Q9NP99 234 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 AGAP14A8MT82 685 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SUSD5O60279 629 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SCRG1O75711 98 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SFTPBP07988 381 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 POLR2HP52434 150 aaKnown RBP14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 DNAJC5GQ8N7S2 189 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 CCDC54Q8NEL0 328 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 GIMAP5Q96F15 307 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SFXN2Q96NB2 322 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TEAD3Q99594 435 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SLA2Q9H6Q3 261 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 NRIP3Q9NQ35 241 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 RBBP6Q7Z6E9 1792 aaKnown RBP14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 GPX5O75715 221 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TFP02787 698 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SBK2P0C263 348 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 CD1CP29017 333 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 CTBP2P56545 445 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SLC2A12Q8TD20 617 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TM9SF4Q92544 642 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 NTNG1Q9Y2I2 539 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TRAV36DV7A0A075B6V5 113 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 SC5DO75845 299 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 TMEM225BP0DP42 221 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 NKPD1Q17RQ9 610 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 C9orf50Q5SZB4 431 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 RABEPKQ7Z6M1 372 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 MISPQ8IVT2 679 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 ZNF160Q9HCG1 818 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 RCE1Q9Y256 329 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 UGT2A1Q9Y4X1 527 aa14.15□□□□□ -0.14
PCDHA3-202ENST00000532566 A0A0A6YYD5 115 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF736B4DX44 427 aaPredicted RBP14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 PAHP00439 452 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 AKAIN1P0CW23 69 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 RAB3AP20336 220 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 CD34P28906 385 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 PER3P56645 1201 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 LTBQ06643 244 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 COL28A1Q2UY09 1125 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 C14orf28Q4W4Y0 310 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 PAQR6Q6TCH4 344 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 OPN5Q6U736 354 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 FIP1L1Q6UN15 594 aaKnown RBP14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 ZNF511Q8NB15 262 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 SPTSSAQ969W0 71 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 NOX1Q9Y5S8 564 aa14.14□□□□□ -0.15
PCDHA3-202ENST00000532566 F5H5K5 113 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms