RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 DCLRE1BQ9H816 532 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 COQ10BQ9H8M1 238 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 CORINQ9Y5Q5 1042 aa11.23□□□□□ -0.61
COPB1-208ENST00000532088 A0A0J9YW62 118 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 ZC3H12DA2A288 527 aaKnown RBP11.22□□□□□ -0.61
COPB1-208ENST00000532088 FTCDNL1E5RQL4 147 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 EIF1BO60739 113 aaKnown RBP11.22□□□□□ -0.61
COPB1-208ENST00000532088 WDR1O75083 606 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 CCNB2O95067 398 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 TFPIP10646 304 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 TCEA1P23193 301 aaKnown RBP11.22□□□□□ -0.61
COPB1-208ENST00000532088 STARP49675 285 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 CLDN15P56746 228 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 CLDN20P56880 219 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 SLC35A1P78382 337 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 MYBPHQ13203 477 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 RIPK1Q13546 671 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 MICAQ29983 383 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 EXOC3L2Q2M3D2 409 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 ANKDD1AQ495B1 522 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 HBMQ6B0K9 141 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 ADGRE4PQ86SQ3 457 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 HIPK1Q86Z02 1210 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 CDK20Q8IZL9 346 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 SCAIQ8N9R8 606 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 ADPRHL1Q8NDY3 354 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 OR4K5Q8NGD3 323 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 OR52J3Q8NH60 311 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 OR5K1Q8NHB7 308 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 PIGXQ8TBF5 258 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 FAM57AQ8TBR7 257 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 DNAJC9Q8WXX5 260 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 ZHX1-C8orf76Q96EF9 292 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 KTI12Q96EK9 354 aaPredicted RBP11.22□□□□□ -0.61
COPB1-208ENST00000532088 ARL5BQ96KC2 179 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 OR5B2Q96R09 309 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 TAPBPLQ9BX59 468 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 FKRPQ9H9S5 495 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 EPG5Q9HCE0 2579 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 MEPEQ9NQ76 525 aaPredicted RBP11.22□□□□□ -0.61
COPB1-208ENST00000532088 VNN3Q9NY84 501 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 ZNF229Q9UJW7 825 aa11.22□□□□□ -0.61
COPB1-208ENST00000532088 RRP15Q9Y3B9 282 aaKnown RBP11.22□□□□□ -0.61
COPB1-208ENST00000532088 FREM3P0C091 2139 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 KMT2BQ9UMN6 2715 aaPredicted RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 LIPT2A6NK58 231 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 NPIPA2E9PIF3 369 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 NPIPA3F8WFD2 350 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 H0Y3Z8 333 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 PRRG2O14669 202 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 TNFSF11O14788 317 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 MGRN1O60291 552 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 E2F6O75461 281 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 WISP2O76076 250 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 BGLAPP02818 100 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 IMPDH2P12268 514 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 CCNA2P20248 432 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 FUT4P22083 530 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SHC1P29353 583 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SFTPDP35247 375 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 OMPP47874 163 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SLC9A3P48764 834 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 DIO1P49895 249 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 AGFG1P52594 562 aaKnown RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 SUCLG1P53597 346 aaKnown RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 MLLT10P55197 1068 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 CARD18P57730 90 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 HSF1Q00613 529 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SEC23BQ15437 767 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 ZNF74Q16587 644 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 GXYLT1Q4G148 440 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SOWAHCQ53LP3 525 aaPredicted RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 ZNF770Q6IQ21 691 aaPredicted RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 HMBOX1Q6NT76 420 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 C1orf94Q6P1W5 598 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 PAQR6Q6TCH4 344 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 TMPRSS11FQ6ZWK6 438 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 CHMP1BQ7LBR1 199 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 MAMDC2Q7Z304 686 aaPredicted RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 ZDHHC13Q8IUH4 622 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 NRMQ8IXM6 262 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 GALNT11Q8NCW6 608 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 ATP6V1C2Q8NEY4 427 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 OR10D3Q8NH80 312 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 GIPC3Q8TF64 312 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SMPDL3BQ92485 455 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 TAAR8Q969N4 342 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 BPIFA2Q96DR5 249 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 SGTBQ96EQ0 304 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 PKP2Q99959 881 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 DGCR6LQ9BY27 220 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 OR11A1Q9GZK7 315 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 GABARAPL1Q9H0R8 117 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 TMEM185BQ9H7F4 350 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 ALKBH4Q9NXW9 302 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 STX18Q9P2W9 335 aaKnown RBP11.21□□□□□ -0.61
COPB1-208ENST00000532088 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.61
COPB1-208ENST00000532088 ZNF175Q9Y473 711 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms