RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 GSX1Q9H4S2 264 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ANKRD19PQ9H560 264 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 GDF2Q9UK05 429 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 FBXW11Q9UKB1 542 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ADAMTS6Q9UKP5 1117 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 TOGARAM1Q9Y4F4 1720 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 TISP43B9A030 160 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 SLC31A1O15431 190 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 NUDT21O43809 227 aaKnown RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 GLSO94925 669 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 P2RX3P56373 397 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 HSD17B7P56937 341 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 HIST1H3AP68431 136 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 TAF10Q12962 218 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 GPR176Q14439 515 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 PROX2Q3B8N5 592 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 TMEM244Q5VVB8 128 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 RETREG3Q86VR2 466 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 KLHDC8BQ8IXV7 354 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 MKXQ8IYA7 352 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 C12orf29Q8N999 325 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 OR5D14Q8NGL3 314 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 OR4K13Q8NH42 304 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 FAM71F1Q96KD3 344 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 RPL10LQ96L21 214 aaKnown RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 PRAP1Q96NZ9 151 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF317Q96PQ6 595 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 DCLRE1CQ96SD1 692 aaKnown RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 NKX3-1Q99801 234 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ZBTB20Q9HC78 741 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ATP13A2Q9NQ11 1180 aa6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ATXN7L1Q9ULK2 861 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-229ENST00000531014 ZNF831Q5JPB2 1677 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 ANKRD30BLA7E2S9 258 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SMLR1H3BR10 107 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 CXCL10P02778 98 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 FAM163BP0C2L3 166 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 STAG3L3P0CL85 134 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SHMT2P34897 504 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 WASP42768 502 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 PTGIRP43119 386 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SGSHP51688 502 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SLC35A2P78381 396 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 MRPS21P82921 87 aaKnown RBP6.77□□□□□ -1.33
CTNND1-229ENST00000531014 P2RY14Q15391 338 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 PIWIL3Q7Z3Z3 882 aaKnown RBP6.77□□□□□ -1.33
CTNND1-229ENST00000531014 UBE3DQ7Z6J8 389 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 PARP16Q8N5Y8 322 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 IL31RAQ8NI17 732 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SPPL3Q8TCT6 385 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 APH1BQ8WW43 257 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 HMCESQ96FZ2 354 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 PIGQQ9BRB3 760 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 CCM2Q9BSQ5 444 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 EDEM2Q9BV94 578 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 AK3Q9UIJ7 227 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 A0A1B0GTQ1 180 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 CDHR4A6H8M9 788 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF727A8MUV8 499 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SLC16A6O15403 523 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 HPGDSO60760 199 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 CPNE6O95741 557 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 CBX7O95931 251 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 OSMP13725 252 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 KCNE1P15382 129 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GCH1P30793 250 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GATMP50440 423 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 HADHBP55084 474 aaKnown RBP6.77□□□□□ -1.33
CTNND1-229ENST00000531014 NHLH1Q02575 133 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 NHLH2Q02577 135 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GLO1Q04760 184 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 DHRS13Q6UX07 377 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GKN2Q86XP6 184 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 UBAC2Q8NBM4 344 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 ZBTB44Q8NCP5 570 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 OR2G3Q8NGZ4 309 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 OR52P1PQ8NH57 321 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 STT3BQ8TCJ2 826 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GGHQ92820 318 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 NDFIP1Q9BT67 221 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 RAB6CQ9H0N0 254 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 OR51B5Q9H339 312 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 HRASLSQ9HDD0 168 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 ZNF281Q9Y2X9 895 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 VSTM2BA6NLU5 285 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 A8MU76 341 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 HEPACAM2A8MVW5 462 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 PEX10O60683 326 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 MMP20O60882 483 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SLC43A1O75387 559 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 RAF1P04049 648 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 ACP5P13686 325 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 TACR3P29371 465 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 CRABP1P29762 137 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GABRA3P34903 492 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 PPOXP50336 477 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 OR10A3P58181 314 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 GPR85P60893 370 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 RAC1P63000 192 aa6.77□□□□□ -1.33
CTNND1-229ENST00000531014 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms