RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 KCNAB1Q14722 419 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PRTGQ2VWP7 1150 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PGGHGQ32M88 737 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
USP35-207ENST00000530546 RGS7BPQ6MZT1 257 aaPredicted RBP10.63□□□□□ -0.71
USP35-207ENST00000530546 CD200R1LQ6Q8B3 271 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 FGD2Q7Z6J4 655 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 GKN2Q86XP6 184 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 TMEM239Q8WW34 195 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 ST8SIA2Q92186 375 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 FGF11Q92914 225 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 CTHRC1Q96CG8 243 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 HSPA12BQ96MM6 686 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 UBL7Q96S82 380 aaPredicted RBP10.63□□□□□ -0.71
USP35-207ENST00000530546 ENKD1Q9H0I2 346 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 DLL4Q9NR61 685 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PRTFDC1Q9NRG1 225 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 COPZ2Q9P299 210 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 PFDN2Q9UHV9 154 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 LAMA1P25391 3075 aa10.63□□□□□ -0.71
USP35-207ENST00000530546 IGHV5-51A0A0C4DH38 117 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 SMIM30A4D0T7 59 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 IGKV1D-16P01601 117 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 NME1P15531 152 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 CSNK1EP49674 416 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 RAG2P55895 527 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 PSG6Q00889 435 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ZNHIT3Q15649 155 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 LILRB2Q8N423 598 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 RFT1Q96AA3 541 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 C12orf57Q99622 126 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 TEX12Q9BXU0 123 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 SPRTNQ9H040 489 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 ABCG5Q9H222 651 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 SAV1Q9H4B6 383 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 MED20Q9H944 212 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 NUDT15Q9NV35 164 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 FBXL21Q9UKT6 434 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 MRPS7Q9Y2R9 242 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 SF3B6Q9Y3B4 125 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 NPTNQ9Y639 398 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 CACNG2Q9Y698 323 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 A0A1W2PR77 199 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ZC3H12DA2A288 527 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 UNC119BA6NIH7 251 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 CHURC1-FNTBB4DL54 471 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 SOCS6O14544 535 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 GPR171O14626 319 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 SURF4O15260 269 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 SAGP10523 405 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 RPS4Y1P22090 263 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 LCN1P31025 176 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 BLVRAP53004 296 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 WNT4P56705 351 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 IGSF11Q5DX21 431 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 FCRLBQ6BAA4 426 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 CPOQ8IVL8 374 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 POGLUT1Q8NBL1 392 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 OR2T33Q8NG76 320 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ACOT12Q8WYK0 555 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 YIPF5Q969M3 257 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 DGAT2Q96PD7 388 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 OR52D1Q9H346 318 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ERVK-19Q9WJR5 959 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 TMEM184BQ9Y519 407 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 TRDV1A0A1B0GX56 115 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 F8W036 122 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 KLF4O43474 513 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 NKX2-2O95096 273 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 FGF2P09038 288 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 MYF5P13349 255 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 S1PR1P21453 382 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 GAS1P54826 345 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 RPS25P62851 125 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 PLAURQ03405 335 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ETFDHQ16134 617 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 NDUFAF6Q330K2 333 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 MINDY4Q4G0A6 757 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ZCCHC12Q6PEW1 402 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 C3P1Q6ZMU1 363 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 ARHGEF39Q8N4T4 335 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 OR13C2Q8NGS9 318 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 OR8K3Q8NH51 312 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 OR51A7Q8NH64 312 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 TCTN2Q96GX1 697 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 UBQLN3Q9H347 655 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 KRCC1Q9NPI7 259 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 SIDT1Q9NXL6 827 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 EMC3Q9P0I2 261 aa10.62□□□□□ -0.71
USP35-207ENST00000530546 H2AFY2Q9P0M6 372 aaPredicted RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 MRPS33Q9Y291 106 aaKnown RBP10.62□□□□□ -0.71
USP35-207ENST00000530546 MYO15AQ9UKN7 3530 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 TEX13CA0A0J9YWL9 993 aa10.61□□□□□ -0.71
USP35-207ENST00000530546 SRPX2O60687 465 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms