RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 HCFC2Q9Y5Z7 792 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 CXorf51AA0A1B0GTR3 108 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 PPP6CO00743 305 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 NCR1O76036 304 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 OR1D4P47884 311 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 LUMP51884 338 aaPredicted RBP7.9□□□□□ -1.15
CTNND1-219ENST00000528621 SPOCK1Q08629 439 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 EXT1Q16394 746 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 TRNP1Q6NT89 227 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 ZFP90Q8TF47 636 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 LRFN5Q96NI6 719 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 NUDT22Q9BRQ3 303 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 SPHK1Q9NYA1 384 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 PISDQ9UG56 409 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 ATPIF1Q9UII2 106 aa7.9□□□□□ -1.15
CTNND1-219ENST00000528621 LOC105369274A0A096LPK9 316 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PRAMEF27A3QJZ7 478 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 KDM4EB2RXH2 506 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 DVL2O14641 736 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 HOXC11O43248 304 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 IL32P24001 234 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 BDKRB2P30411 391 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 HTR1FP30939 366 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SNRPD2P62316 118 aaKnown RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 MFGE8Q08431 387 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PRAMEF9Q5VWM5 478 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 LPCAT3Q6P1A2 487 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 OR4N4Q8N0Y3 316 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 C12orf45Q8N5I9 185 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 LINC01465Q8N7H1 131 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ACBD4Q8NC06 268 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 OR56B2PQ8NGI1 322 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 MYLIPQ8WY64 445 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ZNF582Q96NG8 517 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 NKX3-1Q99801 234 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 C1orf198Q9H425 327 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PSORS1C1Q9UIG5 152 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 RASD1Q9Y272 281 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 TLCD2A6NGC4 264 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 H7C1Q1 480 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ZNF593O00488 134 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 OPN1LWP04000 364 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 MSR1P21757 451 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PTPN6P29350 595 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 HTR5AP47898 357 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 RPL34P49207 117 aaKnown RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 DAPP51397 102 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SEMA3BQ13214 749 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 GPR19Q15760 415 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SLC36A2Q495M3 483 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ZNF836Q6ZNA1 936 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SLC16A14Q7RTX9 510 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ZNF679Q8IYX0 411 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PARP16Q8N5Y8 322 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 OR4K15Q8NH41 348 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 FER1L6-AS2Q96M78 137 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 COQ10AQ96MF6 247 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 NICN1Q9BSH3 213 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ZNF436Q9C0F3 470 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 NOSIPQ9Y314 301 aaKnown RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 KLK4Q9Y5K2 254 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ARAP2Q8WZ64 1704 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 A0A087WUU8 490 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 A0A0D9SG52 128 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ARPC5O15511 151 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 MT-ATP6P00846 226 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 APOC3P02656 99 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 FPR3P25089 353 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SSTR4P31391 388 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 AFF3P51826 1226 aaKnown RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SRPXP78539 464 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 MBTPS1Q14703 1052 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 RFPL4BQ6ZWI9 263 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 CLDN22Q8N7P3 220 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SSX3Q99909 188 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 WDR83Q9BRX9 315 aaKnown RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PPP1R14DQ9NXH3 145 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 ZNF223Q9UK11 482 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 F8W036 122 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 TAPBPO15533 448 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SIGLEC6O43699 453 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 GABRA2P47869 451 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 RAB4BP61018 213 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 HBMQ6B0K9 141 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 BPHLQ86WA6 291 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SERPINA12Q8IW75 414 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 OR4F15Q8NGB8 312 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 C19orf43Q9BQ61 176 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 PSD2Q9BQI7 771 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 SIAEQ9HAT2 523 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 LHX6Q9UPM6 363 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 TMEM184BQ9Y519 407 aaPredicted RBP7.89□□□□□ -1.15
CTNND1-219ENST00000528621 KAT6AQ92794 2004 aa7.89□□□□□ -1.15
CTNND1-219ENST00000528621 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.88□□□□□ -1.15
CTNND1-219ENST00000528621 TACR3P29371 465 aa7.88□□□□□ -1.15
CTNND1-219ENST00000528621 NKX2-5P52952 324 aaPredicted RBP7.88□□□□□ -1.15
CTNND1-219ENST00000528621 YIF1BQ5BJH7 314 aa7.88□□□□□ -1.15
CTNND1-219ENST00000528621 AFMIDQ63HM1 303 aa7.88□□□□□ -1.15
CTNND1-219ENST00000528621 SLC48A1Q6P1K1 146 aa7.88□□□□□ -1.15
CTNND1-219ENST00000528621 ADIPOR2Q86V24 386 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms