RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 V9GY05 133 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 PAPPA2Q9BXP8 1791 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 TMEM272A0A1B0GTI8 110 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 OLFM2O95897 454 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 CD2P06729 351 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 SNRPD1P62314 119 aaKnown RBP11.53□□□□□ -0.56
TSKU-203ENST00000527881 AIMP2Q13155 320 aaKnown RBP11.53□□□□□ -0.56
TSKU-203ENST00000527881 RNF212Q495C1 297 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 GDF7Q7Z4P5 450 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 CCDC116Q8IYX3 515 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 CDK20Q8IZL9 346 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 EID2Q8N6I1 236 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 FBXO22Q8NEZ5 403 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 CCDC107Q8WV48 283 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 DIO2Q92813 273 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 POFUT1Q9H488 388 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 ASH2LQ9UBL3 628 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 FOXJ3Q9UPW0 622 aa11.53□□□□□ -0.56
TSKU-203ENST00000527881 EFCAB7A8K855 629 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 KCNAB3O43448 404 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 RPP14O95059 124 aaKnown RBP11.52□□□□□ -0.56
TSKU-203ENST00000527881 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.56
TSKU-203ENST00000527881 ABCD3P28288 659 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 GRPRP30550 384 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 SDHAP31040 664 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 RAB2AP61019 212 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 ZNF85Q03923 595 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 HABP2Q14520 560 aaPredicted RBP11.52□□□□□ -0.56
TSKU-203ENST00000527881 ARSGQ96EG1 525 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 PPP1R16AQ96I34 528 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 RPS10P5Q9NQ39 176 aa11.52□□□□□ -0.56
TSKU-203ENST00000527881 HELZP42694 1942 aaKnown RBP11.52□□□□□ -0.56
TSKU-203ENST00000527881 TDRD15B5MCY1 1934 aaKnown RBP11.52□□□□□ -0.57
TSKU-203ENST00000527881 FEZF1A0PJY2 475 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 CPT2P23786 658 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SSR2P43308 183 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 CLDN2P57739 230 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SIRPAP78324 504 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 MRPS10P82664 201 aaKnown RBP11.52□□□□□ -0.57
TSKU-203ENST00000527881 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SCGB2B2Q4G0G5 96 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 OR2B11Q5JQS5 317 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 GDF6Q6KF10 455 aaPredicted RBP11.52□□□□□ -0.57
TSKU-203ENST00000527881 MBOAT2Q6ZWT7 520 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 OVCH1Q7RTY7 1134 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 TMED6Q8WW62 240 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 EDARADDQ8WWZ3 215 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 MAP3K3Q99759 626 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 GLIPR2Q9H4G4 154 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 APMAPQ9HDC9 416 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 INPP5EQ9NRR6 644 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 IGLV3-16A0A075B6K0 115 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 PCDH8O95206 1070 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 ZNF3P17036 446 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 ZNF750Q32MQ0 723 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 JMJD6Q6NYC1 403 aaPredicted RBP11.52□□□□□ -0.57
TSKU-203ENST00000527881 C3orf33Q6P1S2 294 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 FIGNL1Q6PIW4 674 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SLC36A1Q7Z2H8 476 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SKA3Q8IX90 412 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 KCNRGQ8N5I3 272 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SMIM19Q96E16 107 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 FBXO4Q9UKT5 387 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 ZNF337Q9Y3M9 751 aa11.52□□□□□ -0.57
TSKU-203ENST00000527881 SPTBP11277 2137 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 DOCK6Q96HP0 2047 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 TRAV27A0A087WT01 109 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 TRAV14DV4A0A0A6YYC5 116 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 ZNF840PA6NDX5 716 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 GGT3PA6NGU5 568 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 ST8SIA5O15466 376 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 RAD1O60671 282 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 PPP1R3DO95685 299 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 KLK3P07288 261 aaPredicted RBP11.51□□□□□ -0.57
TSKU-203ENST00000527881 PRKXP51817 358 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 IL10RAQ13651 578 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 CDK5R1Q15078 307 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 SGCAQ16586 387 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 DECR1Q16698 335 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 PRAMEF14Q5SWL7 426 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 KHDRBS2Q5VWX1 349 aaKnown RBP11.51□□□□□ -0.57
TSKU-203ENST00000527881 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 ZNF467Q7Z7K2 595 aaPredicted RBP11.51□□□□□ -0.57
TSKU-203ENST00000527881 OR13C2Q8NGS9 318 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 HS6ST2Q96MM7 605 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 SMCO4Q9NRQ5 59 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 SIDT1Q9NXL6 827 aaKnown RBP11.51□□□□□ -0.57
TSKU-203ENST00000527881 SPG21Q9NZD8 308 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 TRPM7Q96QT4 1865 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 OTOFQ9HC10 1997 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 TRAV18A0A075B6X5 111 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 PMS2P1A4D2B8 440 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 OR2F2O95006 317 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 CD34P28906 385 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 OR2B8PP59922 312 aa11.51□□□□□ -0.57
TSKU-203ENST00000527881 ACTC1P68032 377 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms