RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 XKR7Q5GH72 579 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 PRR31Q5SQ13 230 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TSPO2Q5TGU0 170 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TYW3Q6IPR3 259 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 EIF3MQ7L2H7 374 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 SPATA19Q7Z5L4 167 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 RIMKLAQ8IXN7 391 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 PIGXQ8TBF5 258 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 ZFAND2BQ8WV99 257 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TMEM234Q8WY98 164 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 ST8SIA1Q92185 356 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 CNOT9Q92600 299 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 STMN2Q93045 179 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 APOPT1Q96IL0 206 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 FOXN4Q96NZ1 517 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 SORCS2Q96PQ0 1159 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TSC22D3Q99576 134 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 USB1Q9BQ65 265 aaKnown RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 INPP5KQ9BT40 448 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 SOX7Q9BT81 388 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 BHLHE41Q9C0J9 482 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 NMUR2Q9GZQ4 415 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 MYLK2Q9H1R3 596 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 MMADHCQ9H3L0 296 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-210ENST00000527699 SLC17A5Q9NRA2 495 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TMEM160Q9NX00 188 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TAS2R16Q9NYV7 291 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 MID2Q9UJV3 735 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 MGAT4BQ9UQ53 548 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 LRCH1Q9Y2L9 728 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 TMED7Q9Y3B3 224 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 WDR45Q9Y484 360 aa8.66□□□□□ -1.02
CAPN1-210ENST00000527699 ALPK2Q86TB3 2170 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 A6NHS1 94 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 NR5A2O00482 541 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 KIAA0513O60268 411 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 SCN2BO60939 215 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PMS2P2O95744 297 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 APEHP13798 732 aaKnown RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PRPS1L1P21108 318 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 APOBEC3AP31941 199 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 CHI3L1P36222 383 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 APOBEC1P41238 236 aaKnown RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PDLIM4P50479 330 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 EFNA4P52798 201 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 MXRA7P84157 204 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PLAURQ03405 335 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 CHRNB3Q05901 458 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 BNIP2Q12982 314 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 SQLEQ14534 574 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 SYPL1Q16563 259 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 GSTA3Q16772 222 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 FAM120AOSQ5T036 256 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 P2RY8Q86VZ1 359 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 ANKFN1Q8N957 763 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PSMA8Q8TAA3 256 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PNPT1Q8TCS8 783 aaKnown RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 TCP10LQ8TDR4 215 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 DNAJC9Q8WXX5 260 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 MOAP1Q96BY2 351 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 ROPN1LQ96C74 230 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 MSI2Q96DH6 328 aaKnown RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 AURKBQ96GD4 344 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PAIP2Q9BPZ3 127 aaKnown RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 TRMOQ9BU70 441 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PRR14Q9BWN1 585 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 ZNF350Q9GZX5 532 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 EXD2Q9NVH0 621 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 SCOCQ9UIL1 159 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 KCNS2Q9ULS6 477 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PCDHGB4Q9UN71 923 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 FLVCR1Q9Y5Y0 555 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 SPIN1Q9Y657 262 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-210ENST00000527699 PMF1-BGLAPU3KQ54 211 aa8.65□□□□□ -1.02
CAPN1-210ENST00000527699 IGKV3D-15A0A087WSY6 115 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 A0A096LPE4 126 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 IGHV4-61A0A0C4DH41 118 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 A0A1W2PPZ6 126 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 SH3PXD2BA1X283 911 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 LRP5LA4QPB2 252 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 H7C417 338 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 ETV2O00321 342 aaPredicted RBP8.64□□□□□ -1.03
CAPN1-210ENST00000527699 GPR171O14626 319 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 KRT33AO76009 404 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
CAPN1-210ENST00000527699 AKR7A3O95154 331 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 LGI1O95970 557 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 TGFAP01135 160 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 HNF1AP20823 631 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 TACR3P29371 465 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 CLDN8P56748 225 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 PHC1P78364 1004 aa8.64□□□□□ -1.03
CAPN1-210ENST00000527699 ROR2Q01974 943 aaKnown RBP8.64□□□□□ -1.03
CAPN1-210ENST00000527699 DYNC1I2Q13409 638 aaKnown RBP8.64□□□□□ -1.03
CAPN1-210ENST00000527699 CEACAM7Q14002 265 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms