RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 EDAQ92838 391 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 SAT2Q96F10 170 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 GALNT14Q96FL9 552 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 HMCESQ96FZ2 354 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 ZNF514Q96K75 400 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 ADGRG7Q96K78 797 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 TGM7Q96PF1 710 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 FCRL4Q96PJ5 515 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 FANCD2OSQ96PS1 177 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 OR2M4Q96R27 311 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 GPR20Q99678 358 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 TSSK6Q9BXA6 273 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 PARD6GQ9BYG4 376 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 DPH1Q9BZG8 443 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 OR2AG1Q9H205 316 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 TRPV4Q9HBA0 871 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 FGF20Q9NP95 211 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 IL26Q9NPH9 171 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 GPR173Q9NS66 373 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 FAM212BQ9NTI7 297 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 GPATCH2LQ9NWQ4 482 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 SLC25A37Q9NYZ2 338 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 DOK5Q9P104 306 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 WRAP73Q9P2S5 460 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 CLEC2DQ9UHP7 191 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 SLC25A13Q9UJS0 675 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 ZNF225Q9UK10 706 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 FZD1Q9UP38 647 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 GPR55Q9Y2T6 319 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 SNX11Q9Y5W9 270 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 PUS1Q9Y606 427 aaKnown RBP eCLIP5.37□□□□□ -1.55
CD44-225ENST00000527326 STYXL1Q9Y6J8 313 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 COL2A1P02458 1487 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 ZNF831Q5JPB2 1677 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 PHIPQ8WWQ0 1821 aa5.37□□□□□ -1.55
CD44-225ENST00000527326 FNDC1Q4ZHG4 1894 aaPredicted RBP5.37□□□□□ -1.55
CD44-225ENST00000527326 MICAL3Q7RTP6 2002 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 A0A0A6YYC8 382 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 hCG_1809904A0A1W2PP81 198 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 A0A1W2PPH5 198 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 A0A1W2PR64 198 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 A0A1W2PRV1 198 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR2W5A6NFC9 320 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 LRRC14BA6NHZ5 514 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR52A4PA6NMU1 304 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 IQCF5A8MTL0 148 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF705EA8MWA4 302 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 IDSB3KWA1 339 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 C9J4A7 227 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 RNASEK-C17orf49H0YIS7 233 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 I3L1I5 382 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 SULT2B1O00204 365 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 GABRPO00591 440 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 PRRG1O14668 218 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 PHOX2AO14813 284 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 PRODHO43272 600 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF749O43361 778 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SUV39H1O43463 412 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 MFSD11O43934 449 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 DFFBO76075 338 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 GLCEO94923 617 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 GCGP01275 180 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 WNT1P04628 370 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 IFNA6P05013 189 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR5AC1P0C628 307 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 TPT1P13693 172 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 CD1DP15813 335 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ITGB5P18084 799 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ACHEP22303 614 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 DTYMKP23919 212 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CD82P27701 267 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 TEAD1P28347 426 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 IL2RGP31785 369 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CNR2P34972 360 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 MAPK9P45984 424 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR3A1P47881 315 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CAV2P51636 162 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CCR5P51681 352 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 AKR1C2P52895 323 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CAV3P56539 151 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 KLF3P57682 345 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 TPI1P60174 286 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 STXBP1P61764 594 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 SELENOTP62341 195 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 FAM189BP81408 668 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 REEP5Q00765 189 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 HGFACQ04756 655 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 AKR1C1Q04828 323 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 RAB40BQ12829 278 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 DUSP8Q13202 625 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CTBP1Q13363 440 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 TRA2AQ13595 282 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-225ENST00000527326 PAFAH1B3Q15102 231 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 SURF1Q15526 300 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CDO1Q16878 200 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 PLEKHN1Q494U1 663 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 DACT2Q5SW24 774 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 FAM102BQ5T8I3 360 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SYPL2Q5VXT5 272 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 GLT8D1Q68CQ7 371 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms