RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TRNT1Q96Q11 434 aaKnown RBP14.01□□□□□ -0.17
PTPRU-210ENST00000527027 DPY30Q9C005 99 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 ADAM19Q9H013 955 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 RAB1BQ9H0U4 201 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 PLK3Q9H4B4 646 aa14.01□□□□□ -0.17
PTPRU-210ENST00000527027 MARCOQ9UEW3 520 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-210ENST00000527027 FBXO9Q9UK97 447 aaPredicted RBP14.01□□□□□ -0.17
PTPRU-210ENST00000527027 LRP5LA4QPB2 252 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 AGAP5A6NIR3 686 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 LIPT2A6NK58 231 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 AQP7P3A6NL99 342 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 HMGN4O00479 90 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 TCF21O43680 179 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 SPAG7O75391 227 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 AKR7A3O95154 331 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 STAMBPO95630 424 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 UQCRBP14927 111 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 GIFP27352 417 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 CHI3L1P36222 383 aaPredicted RBP14□□□□□ -0.17
PTPRU-210ENST00000527027 PPOXP50336 477 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 NAAAQ02083 359 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 CASP8Q14790 479 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 OR7A5Q15622 319 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 GSTA3Q16772 222 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 ZSWIM7Q19AV6 140 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 C3orf36Q3SXR2 165 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 TMEM225Q6GV28 225 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 GPAT4Q86UL3 456 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 BCL2L2Q92843 193 aaPredicted RBP14□□□□□ -0.17
PTPRU-210ENST00000527027 SLC35A5Q9BS91 424 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 SLC38A1Q9H2H9 487 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 AKTIPQ9H8T0 292 aa14□□□□□ -0.17
PTPRU-210ENST00000527027 MTHFD2LQ9H903 347 aaPredicted RBP14□□□□□ -0.17
PTPRU-210ENST00000527027 CRNNQ9UBG3 495 aaPredicted RBP14□□□□□ -0.17
PTPRU-210ENST00000527027 TMEFF2Q9UIK5 374 aaPredicted RBP14□□□□□ -0.17
PTPRU-210ENST00000527027 CFAP73A6NFT4 308 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 ZNF587BE7ETH6 402 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 LGI1O95970 557 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 BPGMP07738 259 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 NUDT17P0C025 328 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 CXCR1P25024 350 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 UBE2NP61088 152 aaKnown RBP13.99□□□□□ -0.17
PTPRU-210ENST00000527027 EPS8Q12929 822 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 GNA13Q14344 377 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 SYPL1Q16563 259 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 VHLLQ6RSH7 139 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 LRRC74BQ6ZQY2 392 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 ANKFN1Q8N957 763 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 OR4F15Q8NGB8 312 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 HPS1Q92902 700 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 TESCQ96BS2 214 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 C1orf159Q96HA4 380 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 ZNF317Q96PQ6 595 aaPredicted RBP13.99□□□□□ -0.17
PTPRU-210ENST00000527027 PRDM4Q9UKN5 801 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 TENM1Q9UKZ4 2725 aa13.99□□□□□ -0.17
PTPRU-210ENST00000527027 ARPC4-TTLL3A0A0A6YYG9 625 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 OR6C65A6NJZ3 312 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 VSTM5A8MXK1 200 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 NR5A2O00482 541 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 SNUPNO95149 360 aaKnown RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 VAMP5O95183 116 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 TACSTD2P09758 323 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 CECR9P0C854 216 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 HOXB1P14653 301 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 DAOP14920 347 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 IL7RP16871 459 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 SRP14P37108 136 aaKnown RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 CHN2P52757 468 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 PDCD2Q16342 344 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 CREB3L2Q70SY1 520 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 RIBC1Q8N443 379 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 FAM169BQ8N8A8 192 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 LINC01356Q8N9X3 169 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 NUP37Q8NFH4 326 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 MAGEE2Q8TD90 523 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 AENQ8WTP8 325 aaKnown RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 WDR60Q8WVS4 1066 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 NEU4Q8WWR8 484 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 PPP1R36Q96LQ0 422 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 TAPBPLQ9BX59 468 aa13.98□□□□□ -0.17
PTPRU-210ENST00000527027 MOV10Q9HCE1 1003 aaKnown RBP13.98□□□□□ -0.17
PTPRU-210ENST00000527027 LILRA1O75019 489 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 IGLV1-44P01699 117 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 C1QCP02747 245 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 DBIP07108 87 aaKnown RBP13.97□□□□□ -0.17
PTPRU-210ENST00000527027 ERCC1P07992 297 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-210ENST00000527027 CHRM4P08173 479 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 RPS4Y1P22090 263 aaKnown RBP13.97□□□□□ -0.17
PTPRU-210ENST00000527027 CALCRP30988 508 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 SELENOPP49908 381 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 P2RY4P51582 365 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 RUNX1T1Q06455 604 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 LGALS3BPQ08380 585 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 SPANXN4Q5MJ08 99 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 MRPL2Q5T653 305 aaKnown RBP13.97□□□□□ -0.17
PTPRU-210ENST00000527027 RNF130Q86XS8 419 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 ZNF440Q8IYI8 595 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 CCDC115Q96NT0 180 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 DOK1Q99704 481 aa13.97□□□□□ -0.17
PTPRU-210ENST00000527027 ZNF442Q9H7R0 627 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms