RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 PTOV1Q86YD1 416 aa18.21■□□□□ 0.51
VPS28-206ENST00000526734 ZNF433Q8N7K0 673 aaPredicted RBP18.21■□□□□ 0.51
VPS28-206ENST00000526734 OR9K2Q8NGE7 335 aa18.21■□□□□ 0.51
VPS28-206ENST00000526734 OR52E4Q8NGH9 312 aa18.21■□□□□ 0.51
VPS28-206ENST00000526734 CCL19Q99731 98 aa18.21■□□□□ 0.51
VPS28-206ENST00000526734 KAT8Q9H7Z6 458 aaKnown RBP18.21■□□□□ 0.51
VPS28-206ENST00000526734 RASD1Q9Y272 281 aa18.21■□□□□ 0.51
VPS28-206ENST00000526734 HIVEP1P15822 2718 aa18.21■□□□□ 0.5
VPS28-206ENST00000526734 A0A1B0GWA3 101 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 OR6C65A6NJZ3 312 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 OR5H1A6NKK0 313 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 SLC22A2O15244 555 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 ARHGEF9O43307 516 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 ATP8B1O43520 1251 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 FMO6PO60774 539 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 SMPD2O60906 423 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 MFN2O95140 757 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 AKR7A3O95154 331 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 C8BP07358 591 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 CD3EP07766 207 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 EDNRAP25101 427 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 MTPNP58546 118 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 BNIP2Q12982 314 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 CAPRIN1Q14444 709 aaKnown RBP18.2■□□□□ 0.5
VPS28-206ENST00000526734 PPA1Q15181 289 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 NCMAPQ5T1S8 102 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 SWT1Q5T5J6 900 aaKnown RBP18.2■□□□□ 0.5
VPS28-206ENST00000526734 SHEQ5VZ18 495 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 TMEM225Q6GV28 225 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 ABHD12BQ7Z5M8 362 aaPredicted RBP18.2■□□□□ 0.5
VPS28-206ENST00000526734 TMEM99Q8N816 258 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 ZNF611Q8N823 705 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 POMGNT2Q8NAT1 580 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 C1orf162Q8NEQ5 155 aaPredicted RBP18.2■□□□□ 0.5
VPS28-206ENST00000526734 SLC38A4Q969I6 547 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 SLC47A1Q96FL8 570 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 TMEM27Q9HBJ8 222 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 ADPRHL2Q9NX46 363 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 KLHL14Q9P2G3 628 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 UPB1Q9UBR1 384 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 RNF115Q9Y4L5 304 aa18.2■□□□□ 0.5
VPS28-206ENST00000526734 CIB4A0PJX0 185 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 HS3ST1O14792 307 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 CD99P14209 185 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 AQP1P29972 269 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 PCGF2P35227 344 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 PRRC2AP48634 2157 aaKnown RBP18.19■□□□□ 0.5
VPS28-206ENST00000526734 HOXC5Q00444 222 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 TGFBR3Q03167 851 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 MFSD13AQ14CX5 517 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 STK11Q15831 433 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 ALG10BQ5I7T1 473 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 FAM69AQ5T7M9 428 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.19■□□□□ 0.5
VPS28-206ENST00000526734 C17orf78Q8N4C9 275 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 OR8J3Q8NGG0 315 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 OR6S1Q8NH40 331 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 RASSF5Q8WWW0 418 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 TMUB1Q9BVT8 246 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 SAR1AQ9NR31 198 aa18.19■□□□□ 0.5
VPS28-206ENST00000526734 CCT8L1PA6NM43 557 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 FTCDNL1E5RQL4 147 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 TPST1O60507 370 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 HTR2AP28223 471 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 FAPQ12884 760 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 KLF10Q13118 480 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 MMEL1Q495T6 779 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 ALKBH2Q6NS38 261 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 CGB2Q6NT52 195 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 SEZ6L2Q6UXD5 910 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 AAED1Q7RTV5 226 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 PCYOX1LQ8NBM8 494 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 EPYCQ99645 322 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 AMBRA1Q9C0C7 1298 aa18.18■□□□□ 0.5
VPS28-206ENST00000526734 TRAV36DV7A0A075B6V5 113 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 PDLIM1O00151 329 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 FBP2O00757 339 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 RAD51DO75771 328 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 IGHV3-9P01782 118 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 HOXC12P31275 282 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 NTF4P34130 210 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 P2RY4P51582 365 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 ADAM8P78325 824 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 NKX6-1P78426 367 aaPredicted RBP18.17■□□□□ 0.5
VPS28-206ENST00000526734 GUCY1A3Q02108 690 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 EGR4Q05215 589 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 DMTNQ08495 405 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 SELPLGQ14242 412 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 GPAT4Q86UL3 456 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 COMTD1Q86VU5 262 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 MUS81Q96NY9 551 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 PTDSS2Q9BVG9 487 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 RSPO3Q9BXY4 272 aaPredicted RBP18.17■□□□□ 0.5
VPS28-206ENST00000526734 SLCO5A1Q9H2Y9 848 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 SLC7A10Q9NS82 523 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 CAPN7Q9Y6W3 813 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 FREM1Q5H8C1 2179 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 CELSR1Q9NYQ6 3014 aa18.17■□□□□ 0.5
VPS28-206ENST00000526734 A0A087WUJ7 227 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms