RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 UHRF1BP1Q6BDS2 1440 aa3.18□□□□□ -1.9
CD44-223ENST00000526553 ATP10BO94823 1461 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 PPIAL4EA0A075B759 164 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 A0A1B0GVL5 298 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 TRDCB7Z8K6 153 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 K7ENP7 123 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 SULT2B1O00204 365 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 MED7O43513 233 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 OR10H3O60404 316 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 HCN1O60741 890 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 ERLIN1O75477 346 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 SCRG1O75711 98 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 NOL4O94818 638 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 GNA14O95837 355 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 LALBAP00709 142 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 HSPB1P04792 205 aaKnown RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 LGALS2P05162 132 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 STSP08842 583 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 PPIAL4FP0DN26 164 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 TROVE2P10155 538 aaKnown RBP eCLIP3.17□□□□□ -1.9
CD44-223ENST00000526553 PTBP1P26599 531 aaKnown RBP eCLIP3.17□□□□□ -1.9
CD44-223ENST00000526553 GNA11P29992 359 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 FGF9P31371 208 aaPredicted RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 CCR1P32246 355 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 GYG1P46976 350 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 RPL29P47914 159 aaKnown RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 ATP1B3P54709 279 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 WNT4P56705 351 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 OC90Q02509 493 aaPredicted RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 CHRNB3Q05901 458 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 SLC10A7Q0GE19 358 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 BST1Q10588 318 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 ASPHQ12797 758 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 TRIM16LQ309B1 348 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 ARMC12Q5T9G4 340 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 OR2A2Q6IF42 318 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 GDPD3Q7L5L3 318 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 CEND1Q8N111 149 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 SETD7Q8WTS6 366 aaKnown RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 HTR3CQ8WXA8 447 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 PSMG2Q969U7 264 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 IFT74Q96LB3 600 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 TCEANC2Q96MN5 208 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 CLCC1Q96S66 551 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 CYP2S1Q96SQ9 504 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 MCHR1Q99705 422 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 VCPKMTQ9H867 229 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 POPDC2Q9HBU9 364 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 PAK1IP1Q9NWT1 392 aaPredicted RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 RAB20Q9NX57 234 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 SLC2A8Q9NY64 477 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 B3GNT2Q9NY97 397 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 ERVW-1Q9UQF0 538 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 PDE10AQ9Y233 779 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 CAB39Q9Y376 341 aaPredicted RBP3.17□□□□□ -1.9
CD44-223ENST00000526553 PPIAL4AQ9Y536 164 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 N6AMT1Q9Y5N5 214 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 RAPGEF6Q8TEU7 1601 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 C3P01024 1663 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 TTC37Q6PGP7 1564 aa3.17□□□□□ -1.9
CD44-223ENST00000526553 HECW1Q76N89 1606 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 ANKRD30BQ9BXX2 1392 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 A0A1B0GWB2 263 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 DHRS7CA6NNS2 312 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 PFKFB2O60825 505 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 RAMP3O60896 148 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 GPX5O75715 221 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 DIRAS1O95057 198 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 MCF2P10911 925 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 POLR2EP19388 210 aaKnown RBP3.16□□□□□ -1.9
CD44-223ENST00000526553 ANXA13P27216 316 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 ADORA2BP29275 332 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 EPHX2P34913 555 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 KIR2DS2P43631 304 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 LIM2P55344 173 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 RIPK4P57078 832 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 MRPL28Q13084 256 aaKnown RBP3.16□□□□□ -1.9
CD44-223ENST00000526553 PPP1R7Q15435 360 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 SBK1Q52WX2 424 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 TFAP2EQ6VUC0 442 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 DNM1P46Q6ZS02 220 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 TRIM69Q86WT6 500 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 ECHDC2Q86YB7 292 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 TTC5Q8N0Z6 440 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 ATP6V0D2Q8N8Y2 350 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 OR1L4Q8NGR5 311 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 RAB3IL1Q8TBN0 382 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 MAGEE2Q8TD90 523 aaPredicted RBP3.16□□□□□ -1.9
CD44-223ENST00000526553 SEC22AQ96IW7 307 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 MTMR9Q96QG7 549 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 IL4I1Q96RQ9 567 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 GPR61Q9BZJ8 451 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 NCOR1P1Q9H4R4 102 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 NIPAL2Q9H841 368 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 YY1AP1Q9H869 796 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 BFARQ9NZS9 450 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 IKZF2Q9UKS7 526 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 ANGPTL2Q9UKU9 493 aa3.16□□□□□ -1.9
CD44-223ENST00000526553 PLLPQ9Y342 182 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms