RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 VANGL1Q8TAA9 524 aaPredicted RBP15.36■□□□□ 0.05
LMX1B-203ENST00000526117 GEMIN6Q8WXD5 167 aaKnown RBP15.36■□□□□ 0.05
LMX1B-203ENST00000526117 PRR14Q9BWN1 585 aa15.36■□□□□ 0.05
LMX1B-203ENST00000526117 GALNT8Q9NY28 637 aa15.36■□□□□ 0.05
LMX1B-203ENST00000526117 KCNN3Q9UGI6 736 aa15.36■□□□□ 0.05
LMX1B-203ENST00000526117 RPS6KA6Q9UK32 745 aa15.36■□□□□ 0.05
LMX1B-203ENST00000526117 DCHS2Q6V1P9 2916 aa15.36■□□□□ 0.05
LMX1B-203ENST00000526117 CENPEQ02224 2701 aa15.36■□□□□ 0.05
LMX1B-203ENST00000526117 B2RBV5 119 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 THY1P04216 161 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 KLK2P20151 261 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 P2RY4P51582 365 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 MXRA7P84157 204 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 SLC17A1Q14916 467 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 POU4F3Q15319 338 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 GLYATQ6IB77 296 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 ZNF474Q6S9Z5 364 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-203ENST00000526117 MEX3BQ6ZN04 569 aaKnown RBP15.35■□□□□ 0.05
LMX1B-203ENST00000526117 BEND4Q6ZU67 534 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 LUZP2Q86TE4 346 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 STK32CQ86UX6 486 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 TSPYL5Q86VY4 417 aaPredicted RBP15.35■□□□□ 0.05
LMX1B-203ENST00000526117 C14orf79Q96F83 325 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 CDRT15Q96T59 188 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 OR10A4Q9H209 315 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 FANCFQ9NPI8 374 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 DCAF13Q9NV06 445 aaKnown RBP15.35■□□□□ 0.05
LMX1B-203ENST00000526117 CLEC4AQ9UMR7 237 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 SAMD4AQ9UPU9 718 aaKnown RBP15.35■□□□□ 0.05
LMX1B-203ENST00000526117 CORINQ9Y5Q5 1042 aa15.35■□□□□ 0.05
LMX1B-203ENST00000526117 LOC102725191A0A1B0GVB3 256 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 CPSF4LA6NMK7 179 aaKnown RBP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 ZNF814B7Z6K7 855 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 GMNNO75496 209 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 SMNDC1O75940 238 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 GOSR1O95249 250 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 MT-ATP6P00846 226 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 SERPINA1P01009 418 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 CD79BP40259 229 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 RBM34P42696 430 aaKnown RBP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 OR7A5Q15622 319 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 IFI44LQ53G44 452 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 OTUD3Q5T2D3 398 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 TFAP2EQ6VUC0 442 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 GALNT5Q7Z7M9 940 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 SCAIQ8N9R8 606 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 ZNF610Q8N9Z0 462 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 FAM162AQ96A26 154 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 MARVELD3Q96A59 401 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 TMEM45BQ96B21 275 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 KTI12Q96EK9 354 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 SLC41A3Q96GZ6 507 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 TPD52L3Q96J77 140 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 PRRC1Q96M27 445 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 OPN3Q9H1Y3 402 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 MUC13Q9H3R2 512 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 PRPF19Q9UMS4 504 aaKnown RBP15.34■□□□□ 0.05
LMX1B-203ENST00000526117 RASD1Q9Y272 281 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 B3GALT5Q9Y2C3 310 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 SNX13Q9Y5W8 968 aa15.34■□□□□ 0.05
LMX1B-203ENST00000526117 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 IFNW1P05000 195 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 UQCRC1P31930 480 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 RPS5P46782 204 aaKnown RBP15.33■□□□□ 0.04
LMX1B-203ENST00000526117 OR1E2P47887 323 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 OR3A2P47893 321 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 ZNF787Q6DD87 383 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 WDR88Q6ZMY6 472 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 GDF7Q7Z4P5 450 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 CCDC103Q8IW40 242 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 TAAR8Q969N4 342 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 ZNF300Q96RE9 604 aaPredicted RBP15.33■□□□□ 0.04
LMX1B-203ENST00000526117 PRSS27Q9BQR3 290 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 EGFL7Q9UHF1 273 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 SLC7A7Q9UM01 511 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 FLVCR1Q9Y5Y0 555 aa15.33■□□□□ 0.04
LMX1B-203ENST00000526117 RAMP1O60894 148 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 ZNF682O95780 498 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 BGLAPP02818 100 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 NCK1P16333 377 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 TNFRSF1BP20333 461 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 TAS2R41P59536 307 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 MTX3Q5HYI7 312 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 HIST2H2BCQ6DN03 193 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 TTC33Q6PID6 262 aaPredicted RBP15.32■□□□□ 0.04
LMX1B-203ENST00000526117 DEF8Q6ZN54 512 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 RINLQ6ZS11 566 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 Q6ZT83 130 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 NUFIP2Q7Z417 695 aaKnown RBP15.32■□□□□ 0.04
LMX1B-203ENST00000526117 VTCN1Q7Z7D3 282 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 OFCC1Q8IZS5 231 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 RNF148Q8N7C7 305 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 TMEM99Q8N816 258 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 FAM222BQ8WU58 562 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 POP5Q969H6 163 aaKnown RBP15.32■□□□□ 0.04
LMX1B-203ENST00000526117 HSH2DQ96JZ2 352 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 HS6ST2Q96MM7 605 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 AMBRA1Q9C0C7 1298 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 PARPBPQ9NWS1 579 aa15.32■□□□□ 0.04
LMX1B-203ENST00000526117 TAS2R1Q9NYW7 299 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms