RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PHLDA1Q8WV24 401 aaPredicted RBP2.59□□□□□ -1.99
CSDE1-209ENST00000525132 HSD17B8Q92506 261 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 NT5C3BQ969T7 300 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 PINX1Q96BK5 328 aaKnown RBP2.59□□□□□ -1.99
CSDE1-209ENST00000525132 LRRC58Q96CX6 371 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 SCMH1Q96GD3 660 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 SLC41A3Q96GZ6 507 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 GSDMAQ96QA5 445 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 OR1F2PQ96R84 312 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 PKIBQ9C010 78 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 THAP2Q9H0W7 228 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 SLC26A1Q9H2B4 701 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 CALHM2Q9HA72 323 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 SH2D2AQ9NP31 389 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 RAB20Q9NX57 234 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 PLEK2Q9NYT0 353 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 LHX3Q9UBR4 397 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 PRODH2Q9UF12 536 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 ZDHHC2Q9UIJ5 367 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 MRTO4Q9UKD2 239 aaKnown RBP2.59□□□□□ -1.99
CSDE1-209ENST00000525132 SLC7A7Q9UM01 511 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 STUB1Q9UNE7 303 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 MOKQ9UQ07 419 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 OR1A2Q9Y585 309 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 AP4B1Q9Y6B7 739 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 COLEC10Q9Y6Z7 277 aa2.59□□□□□ -1.99
CSDE1-209ENST00000525132 DNAH5Q8TE73 4624 aa2.59□□□□□ -2
CSDE1-209ENST00000525132 USH2AO75445 5202 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 TRIP11Q15643 1979 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ARPC4-TTLL3A0A0A6YYG9 625 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 H0YIV9 168 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 MLNRO43193 412 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 COCHO43405 550 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PRKRAO75569 313 aaKnown RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 RHBDL1O75783 438 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 GOT2P00505 430 aaKnown RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CT45A8P0DMV1 189 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CT45A9P0DMV2 189 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 SNHG28P0DPA3 235 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ZNF23P17027 643 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 EPHA2P29317 976 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 HOXD3P31249 432 aaPredicted RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 AHRP35869 848 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 NAPAP54920 295 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CDH11P55287 796 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 DSCR9P59020 149 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 B3GALT5-AS1P59052 145 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 LAMTOR4Q0VGL1 99 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ZBTB17Q13105 803 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ITGA9Q13797 1035 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 EFTUD2Q15029 972 aaKnown RBP eCLIP2.58□□□□□ -22e-10■□□□□ 9.1
CSDE1-209ENST00000525132 HERC3Q15034 1050 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PDK3Q15120 406 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CALCRLQ16602 461 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 MPPE1Q53F39 396 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CT45A2Q5DJT8 189 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 GPRC6AQ5T6X5 926 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PRAMEF20Q5VT98 475 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 TAF3Q5VWG9 929 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 RTL6Q6ICC9 239 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 C8orf82Q6P1X6 216 aaPredicted RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 TMEM64Q6YI46 380 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CENPUQ71F23 418 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 TMEM219Q86XT9 240 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PIANPQ8IYJ0 282 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 UBQLNLQ8IYU4 475 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CLIP4Q8N3C7 705 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 DNAJC22Q8N4W6 341 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ZNF525Q8N782 197 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PRR26Q8N8Z3 221 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 OR6M1Q8NGM8 313 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 SPATA22Q8NHS9 363 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 TRMT10AQ8TBZ6 339 aaKnown RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 C2orf15Q8WU43 125 aaKnown RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 GIMAP1Q8WWP7 306 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 TMEM37Q8WXS4 190 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 C22orf15Q8WYQ4 148 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PIK3R3Q92569 461 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 P3H4Q92791 437 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 OSTF1Q92882 214 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 SLC35C1Q96A29 364 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 TADA1Q96BN2 335 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 BPIFA2Q96DR5 249 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 PHF21BQ96EK2 531 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ZNF274Q96GC6 653 aaPredicted RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 ZNF479Q96JC4 524 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 LYZL4Q96KX0 146 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 VPS35Q96QK1 796 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 KRT12Q99456 494 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 S1PR3Q99500 378 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 AGPAT1Q99943 283 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 NDUFAF3Q9BU61 184 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 RBM24Q9BX46 236 aaKnown RBP2.58□□□□□ -2
CSDE1-209ENST00000525132 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 CLSTN2Q9H4D0 955 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 ZNF665Q9H7R5 613 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 METTL7AQ9H8H3 244 aa2.58□□□□□ -2
CSDE1-209ENST00000525132 EVA1AQ9H8M9 152 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms