RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RPP38P78345 283 aaKnown RBP5.85□□□□□ -1.47
NEDD8-203ENST00000524927 MSLNQ13421 630 aaPredicted RBP5.85□□□□□ -1.47
NEDD8-203ENST00000524927 ARHGAP19Q14CB8 494 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 MORF4L2Q15014 288 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 PON3Q15166 354 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 SLC1A5Q15758 541 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 IGSF11Q5DX21 431 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 NCBP2-AS2Q69YL0 99 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF549Q6P9A3 640 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 CES3Q6UWW8 571 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF321PQ8N8H1 164 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 Q8NFD4 153 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 SPPL2AQ8TCT8 520 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 MUCL1Q96DR8 90 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 DTNBP1Q96EV8 351 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 SFXN2Q96NB2 322 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 PAFAH2Q99487 392 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 PINK1Q9BXM7 581 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 TXLNGYQ9BZA5 131 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 RACGAP1Q9H0H5 632 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 FAM234AQ9H0X4 552 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 ACTR8Q9H981 624 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 MYNNQ9NPC7 610 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 TEX10Q9NXF1 929 aaPredicted RBP5.85□□□□□ -1.47
NEDD8-203ENST00000524927 PLEK2Q9NYT0 353 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 SMARCAL1Q9NZC9 954 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 NPAP1Q9NZP6 1156 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 FAM153AQ9UHL3 310 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 NUP50Q9UKX7 468 aa5.85□□□□□ -1.47
NEDD8-203ENST00000524927 TET2Q6N021 2002 aaPredicted RBP5.85□□□□□ -1.47
NEDD8-203ENST00000524927 IGHV4-28A0A0C4DH34 117 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 E9PQ18 207 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 PSMA7O14818 248 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 ADAM20O43506 726 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 PLGP00747 810 aaPredicted RBP5.84□□□□□ -1.47
NEDD8-203ENST00000524927 IFNA16P05015 189 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 RHOXF2BP0C7M4 288 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 HOXD3P31249 432 aaPredicted RBP5.84□□□□□ -1.47
NEDD8-203ENST00000524927 CCR7P32248 378 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 MSH2P43246 934 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 BDKRB1P46663 353 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 ITIH4Q14624 930 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF658Q5TYW1 1059 aaPredicted RBP5.84□□□□□ -1.47
NEDD8-203ENST00000524927 CAPN13Q6MZZ7 669 aaPredicted RBP5.84□□□□□ -1.47
NEDD8-203ENST00000524927 ANGPTL8Q6UXH0 198 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 TAS2R42Q7RTR8 314 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 KRT74Q7RTS7 529 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 ZNF740Q8NDX6 193 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 LINC01006Q8NI28 216 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 FBXO17Q96EF6 278 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 PRAP1Q96NZ9 151 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 HAUS8Q9BT25 410 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 KCNN2Q9H2S1 579 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 PRTFDC1Q9NRG1 225 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 RMND1Q9NWS8 449 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 OPN4Q9UHM6 478 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 GRID1Q9ULK0 1009 aa5.84□□□□□ -1.47
NEDD8-203ENST00000524927 MRPS18CQ9Y3D5 142 aaKnown RBP5.84□□□□□ -1.47
NEDD8-203ENST00000524927 KRT87PA6NCN2 255 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 AQP8O94778 261 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 CH25HO95992 272 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 ERCC1P07992 297 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 SAGP10523 405 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 C21orf33P30042 268 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 SRD5A2P31213 254 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 HSD17B2P37059 387 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 PPOXP50336 477 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 IDH3GP51553 393 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 CLDN15P56746 228 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 LMO4P61968 165 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 CSNK2A1P68400 391 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 MYBPC1Q00872 1141 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 RASA2Q15283 850 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 EFNB3Q15768 340 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF628Q5EBL2 1059 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 ACSM5Q6NUN0 579 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 ALKBH5Q6P6C2 394 aaKnown RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 KCTD18Q6PI47 426 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 IRF2BP2Q7Z5L9 587 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 P2RY8Q86VZ1 359 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 EPHX4Q8IUS5 362 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 NOA1Q8NC60 698 aaKnown RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 KCTD6Q8NC69 237 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 CSNK2A3Q8NEV1 391 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 OR13C4Q8NGS5 318 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 ZNF721Q8TF20 911 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 OIT3Q8WWZ8 545 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 ORAI1Q96D31 301 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 DHTKD1Q96HY7 919 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 EGLN2Q96KS0 407 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 RUNDC3BQ96NL0 473 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 SF3B5Q9BWJ5 86 aaKnown RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 TSSK1BQ9BXA7 367 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 STMN4Q9H169 189 aaPredicted RBP5.83□□□□□ -1.48
NEDD8-203ENST00000524927 RHBGQ9H310 441 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 SLC35C2Q9NQQ7 365 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 GLRX2Q9NS18 164 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 TREM2Q9NZC2 230 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 MYO6Q9UM54 1294 aa5.83□□□□□ -1.48
NEDD8-203ENST00000524927 EXO1Q9UQ84 846 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms