RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CRCPO75575 148 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CREG1O75629 220 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TGDSO95455 350 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 VIMP08670 466 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 HBQ1P09105 142 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ANXA4P09525 319 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 RAB40ALP0C0E4 278 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LAMP1P11279 417 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 RNH1P13489 461 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PAX1P15863 534 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LBPP18428 481 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CAPN3P20807 821 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GPX3P22352 226 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CPN2P22792 545 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CD82P27701 267 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PTPN4P29074 926 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PTPN6P29350 595 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SERPINB1P30740 379 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 FEN1P39748 380 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 FRKP42685 505 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CDKN2CP42773 168 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TSFMP43897 325 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 HOXA1P49639 335 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CDK9P50750 372 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GPR143P51810 404 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 RAP1GDS1P52306 607 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 MAPK12P53778 367 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ERVK-8P63133 956 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 IGLV3-21P80748 117 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 EMX2Q04743 252 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF763Q0D2J5 394 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 C2orf80Q0P641 193 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CHAF1BQ13112 559 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PDE7AQ13946 482 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LTB4RQ15722 352 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 NDUFA9Q16795 377 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 IMPG1Q17R60 797 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PRICKLE4Q2TBC4 344 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ATP6AP1LQ52LC2 224 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TMEM35AQ53FP2 167 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TRMT12Q53H54 448 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SPIN4Q56A73 249 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PDSS1Q5T2R2 415 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 NDUFAF5Q5TEU4 345 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ACSM2BQ68CK6 577 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 OR4F3Q6IEY1 312 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 KRTAP5-4Q6L8H1 288 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SLC48A1Q6P1K1 146 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PRMT9Q6P2P2 845 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CYB5D1Q6P9G0 228 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CYP20A1Q6UW02 462 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TMEM205Q6UW68 189 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 QSOX2Q6ZRP7 698 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ANKRD37Q7Z713 158 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PIGWQ7Z7B1 504 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 NOXA1Q86UR1 476 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GPR180Q86V85 440 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 KRTAP7-1Q8IUC3 87 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TICAM1Q8IUC6 712 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 RNF113BQ8IZP6 322 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CLECL1Q8IZS7 167 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CLEC4FQ8N1N0 589 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 C10orf111Q8N326 155 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 KIF2BQ8N4N8 673 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TBC1D19Q8N5T2 526 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ESX1Q8N693 406 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GBP7Q8N8V2 638 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 APCDD1LQ8NCL9 501 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LSM14AQ8ND56 463 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF248Q8NDW4 579 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PLPP5Q8NEB5 264 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 NFAM1Q8NET5 270 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 VPS37AQ8NEZ2 397 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 OR7A2PQ8NGA2 310 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 OR11G2Q8NGC1 345 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 OR2Y1Q8NGV0 311 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CDC26Q8NHZ8 85 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PTPMT1Q8WUK0 201 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 KCNE4Q8WWG9 221 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 STARD8Q92502 1023 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 RND1Q92730 232 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 FGF11Q92914 225 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ABTB1Q969K4 478 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PPWD1Q96BP3 646 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 TBC1D20Q96BZ9 403 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CHMP6Q96FZ7 201 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PPP3R2Q96LZ3 170 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 C17orf77Q96MU5 243 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF681Q96N22 645 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF583Q96ND8 569 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LITAFQ99732 161 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 CCT7Q99832 543 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 SLC7A5P2Q9GIP4 190 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 GLIPR2Q9H4G4 154 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 RPF2Q9H7B2 306 aaKnown RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 WDR54Q9H977 334 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 COPS7BQ9H9Q2 264 aaPredicted RBP2.66□□□□□ -1.98
CSDE1-208ENST00000524652 LYRM4Q9HD34 91 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 MYNNQ9NPC7 610 aa2.66□□□□□ -1.98
CSDE1-208ENST00000524652 PRTFDC1Q9NRG1 225 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms