RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ULK3Q6PHR2 472 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 Q6ZT83 130 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 RANBP3LQ86VV4 465 aaPredicted RBP18.29■□□□□ 0.52
TRIM35-203ENST00000521253 ZNF100Q8IYN0 542 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 SLC26A7Q8TE54 656 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 KTI12Q96EK9 354 aaPredicted RBP18.29■□□□□ 0.52
TRIM35-203ENST00000521253 PTDSS2Q9BVG9 487 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 MYLK2Q9H1R3 596 aa18.29■□□□□ 0.52
TRIM35-203ENST00000521253 IGKV1D-42A0A075B6H8 117 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 AQP7P3A6NL99 342 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 CCT8L1PA6NM43 557 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 DEFB108AA8MXU0 73 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 FTCDNL1E5RQL4 147 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 PNMTP11086 282 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 VEZF1Q14119 521 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 P2RY6Q15077 328 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 NPTX1Q15818 432 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 SFRP5Q5T4F7 317 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 ERICH5Q6P6B1 374 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 STEAP2Q8NFT2 490 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 OR4D11Q8NGI4 311 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 OR6T1Q8NGN1 323 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 MFSD8Q8NHS3 518 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 SLC38A4Q969I6 547 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 SLC47A1Q96FL8 570 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 MCHR1Q99705 422 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 HDHD5Q9BXW7 423 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 OR10A4Q9H209 315 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 LIME1Q9H400 295 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 CMTM6Q9NX76 183 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 FLVCR1Q9Y5Y0 555 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 FREM1Q5H8C1 2179 aa18.28■□□□□ 0.52
TRIM35-203ENST00000521253 A0A1W2PPR1 153 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 FAM220BPB1ANY3 271 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 FMO6PO60774 539 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 DNAJA1P31689 397 aaKnown RBP18.27■□□□□ 0.52
TRIM35-203ENST00000521253 RPS5P46782 204 aaKnown RBP18.27■□□□□ 0.52
TRIM35-203ENST00000521253 P2RY4P51582 365 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 ITGADQ13349 1161 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 RBM45Q8IUH3 476 aaKnown RBP18.27■□□□□ 0.52
TRIM35-203ENST00000521253 VANGL1Q8TAA9 524 aaPredicted RBP18.27■□□□□ 0.52
TRIM35-203ENST00000521253 RNF217Q8TC41 542 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 APH1AQ96BI3 265 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 S100PBPQ96BU1 408 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 SELENONQ9NZV5 590 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 SLC9A8Q9Y2E8 581 aa18.27■□□□□ 0.52
TRIM35-203ENST00000521253 A0A087WUJ7 227 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 MRPL33O75394 65 aaKnown RBP18.26■□□□□ 0.51
TRIM35-203ENST00000521253 CNOT4O95628 575 aaKnown RBP18.26■□□□□ 0.51
TRIM35-203ENST00000521253 IGHV3-9P01782 118 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 IL32P24001 234 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 CDH12P55289 794 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 ARPINQ7Z6K5 226 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 GPAT4Q86UL3 456 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 P3H2Q8IVL5 708 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 SLC15A3Q8IY34 581 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 OR2T12Q8NG77 320 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 RASSF5Q8WWW0 418 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 KISS1RQ969F8 398 aaPredicted RBP18.26■□□□□ 0.51
TRIM35-203ENST00000521253 TAAR8Q969N4 342 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 SLC25A36Q96CQ1 311 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 SF3B5Q9BWJ5 86 aaKnown RBP18.26■□□□□ 0.51
TRIM35-203ENST00000521253 PLEKHF2Q9H8W4 249 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 EFCAB1Q9HAE3 211 aa18.26■□□□□ 0.51
TRIM35-203ENST00000521253 LYZL6O75951 148 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 SWT1Q5T5J6 900 aaKnown RBP18.25■□□□□ 0.51
TRIM35-203ENST00000521253 FBXW9Q5XUX1 488 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 TMEM225Q6GV28 225 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 C8orf82Q6P1X6 216 aaPredicted RBP18.25■□□□□ 0.51
TRIM35-203ENST00000521253 ZNF613Q6PF04 617 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 C5orf46Q6UWT4 87 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 CASP12Q6UXS9 341 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 MICU2Q8IYU8 434 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 UBE2J2Q8N2K1 259 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 ZIC4Q8N9L1 334 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 OR9K2Q8NGE7 335 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 CMTM5Q96DZ9 223 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 PIK3IP1Q96FE7 263 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 GMPR2Q9P2T1 348 aaKnown RBP18.25■□□□□ 0.51
TRIM35-203ENST00000521253 ITGB1BP2Q9UKP3 347 aa18.25■□□□□ 0.51
TRIM35-203ENST00000521253 TRAV36DV7A0A075B6V5 113 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 ELOVL7A1L3X0 281 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 CPSF4LA6NMK7 179 aaKnown RBP18.24■□□□□ 0.51
TRIM35-203ENST00000521253 OR2T1O43869 369 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 FZD7O75084 574 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 COX5AP20674 150 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 IGHV1-2P23083 117 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 NUDT2P50583 147 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 SLC7A2P52569 658 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 ENTPD8Q5MY95 495 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 FAM69AQ5T7M9 428 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 HACD2Q6Y1H2 254 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 BHLHA15Q7RTS1 189 aaPredicted RBP18.24■□□□□ 0.51
TRIM35-203ENST00000521253 TSPYL5Q86VY4 417 aaPredicted RBP18.24■□□□□ 0.51
TRIM35-203ENST00000521253 WFDC8Q8IUA0 241 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 PROX1Q92786 737 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 TMEM45BQ96B21 275 aa18.24■□□□□ 0.51
TRIM35-203ENST00000521253 ZNF385AQ96PM9 386 aaKnown RBP18.24■□□□□ 0.51
TRIM35-203ENST00000521253 HOPXQ9BPY8 73 aaPredicted RBP18.24■□□□□ 0.51
TRIM35-203ENST00000521253 PARPBPQ9NWS1 579 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms