RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	SKA3	Q8IX90	412 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	C15orf54	Q8N8G6	183 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	AEN	Q8WTP8	325 aa	Known RBP	3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	THRSP	Q92748	146 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	KLHDC3	Q9BQ90	382 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ALG12	Q9BV10	488 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	EDEM2	Q9BV94	578 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	ERVW-1	Q9UQF0	538 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	MEMO1	Q9Y316	297 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	SCN7A	Q01118	1682 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	PRUNE2	Q8WUY3	3088 aa		3.16	□□□□□ -1.9
CTNNA1-222	ENST00000520400	CEMIP	Q8WUJ3	1361 aa		3.15	□□□□□ -1.9
CTNNA1-222	ENST00000520400	MYH13	Q9UKX3	1938 aa		3.15	□□□□□ -1.9
CTNNA1-222	ENST00000520400	IGHV2-70D	A0A0C4DH43	119 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	GSAP	A4D1B5	854 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400		A8MUI8	341 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	KLLN	B2CW77	178 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	PANO1	I0J062	215 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SULT2B1	O00204	365 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	HDAC3	O15379	428 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TBX19	O60806	448 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	MFN2	O95140	757 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	LYPD3	O95274	346 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	IGHV3-48	P01763	117 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SEMG1	P04279	462 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	CD1E	P15812	388 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	RPA2	P15927	270 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	PSMA2	P25787	234 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	RBMX	P38159	391 aa	Known RBP	3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ARFIP1	P53367	373 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	UBE2H	P62256	183 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	GPRC6A	Q5T6X5	926 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TTC23	Q5W5X9	447 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ACOT1	Q86TX2	421 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TMEM123	Q8N131	208 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	FAM133A	Q8N9E0	248 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	C16orf74	Q96GX8	76 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	MS4A14	Q96JA4	679 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	VPS39	Q96JC1	886 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TTC25	Q96NG3	672 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ZSCAN5A	Q9BUG6	496 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	RIBC2	Q9H4K1	309 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SLC17A5	Q9NRA2	495 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	IL36G	Q9NZH8	169 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	OR10H1	Q9Y4A9	318 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ALG6	Q9Y672	507 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	DDX60	Q8IY21	1712 aa	Known RBP	3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	BRCA1	P38398	1863 aa	Known RBP	3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	NAV2	Q8IVL1	2488 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	FANCI	Q9NVI1	1328 aa		3.15	□□□□□ -1.91
CTNNA1-222	ENST00000520400	USP9X	Q93008	2570 aa	Predicted RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SBF1	O95248	1867 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400		K7EQM0	130 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	HAT1	O14929	419 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	NOL3	O60936	208 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	UGT2B4	P06133	528 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ALOX5	P09917	674 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	POLR2E	P19388	210 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	PSMA5	P28066	241 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	LAP3	P28838	519 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	NOV	P48745	357 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	HLCS	P50747	726 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	P2RY4	P51582	365 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	GNB2	P62879	340 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	HERPUD1	Q15011	391 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	LRRC36	Q1X8D7	754 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SLC25A52	Q3SY17	297 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TMEM31	Q5JXX7	168 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	C16orf62	Q7Z3J2	963 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	FAM220A	Q7Z4H9	259 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	CLEC4F	Q8N1N0	589 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	CADM2	Q8N3J6	435 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ANKFN1	Q8N957	763 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	OR4D9	Q8NGE8	314 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	OR56B4	Q8NH76	319 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	OR1F12	Q8NHA8	337 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	IL1F10	Q8WWZ1	152 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	FRAT1	Q92837	279 aa	Predicted RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SH3YL1	Q96HL8	342 aa	Predicted RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	ZNF607	Q96SK3	696 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TXN2	Q99757	166 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SRXN1	Q9BYN0	137 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	NXF5	Q9H1B4	397 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	FARSB	Q9NSD9	589 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	3.14	□□□□□ -1.91	8e-6	■■■□□ 14.7
CTNNA1-222	ENST00000520400	WARS2	Q9UGM6	360 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	MRPS33	Q9Y291	106 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	KIF3A	Q9Y496	699 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	SLX4	Q8IY92	1834 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	KIF13B	Q9NQT8	1826 aa		3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	TPR	P12270	2363 aa	Known RBP	3.14	□□□□□ -1.91
CTNNA1-222	ENST00000520400	MYO5A	Q9Y4I1	1855 aa	Known RBP	3.13	□□□□□ -1.91
CTNNA1-222	ENST00000520400		A0A1B0GUL6	1792 aa		3.13	□□□□□ -1.91
CTNNA1-222	ENST00000520400	DLEC1	Q9Y238	1755 aa		3.13	□□□□□ -1.91
CTNNA1-222	ENST00000520400	CFAP54	Q96N23	3096 aa		3.13	□□□□□ -1.91
CTNNA1-222	ENST00000520400	IGKV1D-8	A0A087WSZ0	117 aa		3.13	□□□□□ -1.91
CTNNA1-222	ENST00000520400	LRP5L	A4QPB2	252 aa		3.13	□□□□□ -1.91
CTNNA1-222	ENST00000520400	METTL21EP	A6NDL7	271 aa		3.13	□□□□□ -1.91

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