RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MYF6P23409 242 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 GLRXP35754 106 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 HSPA7P48741 367 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 VPS41P49754 854 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 IL2P60568 153 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 MRPS22P82650 360 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 TGFBR3Q03167 851 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF117Q03924 483 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 DHX34Q14147 1143 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 HEPACAMQ14CZ8 416 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 TSTQ16762 297 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 GLIPR1L2Q4G1C9 344 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 GPR157Q5UAW9 335 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 FAM219BQ5XKK7 198 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 CYP20A1Q6UW02 462 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 C6orf89Q6UWU4 347 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 LRRN1Q6UXK5 716 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 MTDHQ86UE4 582 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 MDP1Q86V88 176 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 FITM2Q8N6M3 262 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 LINC00482Q8N8I6 264 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 WDR20Q8TBZ3 569 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF675Q8TD23 568 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 RAB40AQ8WXH6 277 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 TIMD4Q96H15 378 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 SERPINB12Q96P63 405 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 DCLRE1CQ96SD1 692 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 EFCAB11Q9BUY7 163 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 CDADC1Q9BWV3 514 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 WDR41Q9HAD4 459 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 ACOXLQ9NUZ1 547 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 NKIRAS2Q9NYR9 191 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 EMC3Q9P0I2 261 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 UPB1Q9UBR1 384 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 OR5V1Q9UGF6 321 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 FBXO5Q9UKT4 447 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 FLVCR1Q9Y5Y0 555 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 COMMD10Q9Y6G5 202 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
CTNNA1-216ENST00000519489 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 FOXE1O00358 373 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 IFNW1P05000 195 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 WNT2P09544 360 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 CSNK2A2P19784 350 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 SLC7A1P30825 629 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 PTPN7P35236 360 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 TAS2R39P59534 338 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ERVS71-1P61550 626 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 GNB2P62879 340 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 DGCR2P98153 550 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 CDKL1Q00532 357 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 IRF8Q02556 426 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 COX10Q12887 443 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF155Q12901 538 aaPredicted RBP5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 NPRL3Q12980 569 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ZMYND11Q15326 602 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 TSNQ15631 228 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 TBCCQ15814 346 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 PRSS53Q2L4Q9 553 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 HFEQ30201 348 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 NDUFAF6Q330K2 333 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 TMPPEQ6ZT21 453 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 OVCH2Q7RTZ1 564 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 CREG2Q8IUH2 290 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ISOC1Q96CN7 298 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ARL5BQ96KC2 179 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ZNF385AQ96PM9 386 aaKnown RBP5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 ATOH8Q96SQ7 321 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 EGFL8Q99944 293 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 MYLK2Q9H1R3 596 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 IL20RAQ9UHF4 553 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 OARD1Q9Y530 152 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 NPTNQ9Y639 398 aa5.53□□□□□ -1.52
CTNNA1-216ENST00000519489 IGHV1-69DA0A0B4J2H0 117 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 A0A1W2PPW3 197 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 GJE1A6NN92 205 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 C22orf46C9J442 243 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 RSL1D1O76021 490 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 TGDSO95455 350 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 PSMG1O95456 288 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 DUS4LO95620 317 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 IGHV1-69P01742 117 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 KLK1P06870 262 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 FDFT1P37268 417 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 EIF1P41567 113 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 MAGEA8P43361 318 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 CLK3P49761 638 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 BPIFB3P59826 476 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 UBE2NP61088 152 aaKnown RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 DECR1Q16698 335 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 MED27Q6P2C8 311 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 CRIP3Q6Q6R5 217 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 ETV3LQ6ZN32 361 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 TSPYL5Q86VY4 417 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 LRRC28Q86X40 367 aaPredicted RBP5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 CALHM3Q86XJ0 350 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 PDZD9Q8IXQ8 264 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 ZNF101Q8IZC7 436 aa5.52□□□□□ -1.53
CTNNA1-216ENST00000519489 B4GALNT2Q8NHY0 566 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms