RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TMEM169Q96HH4 297 aa12.5□□□□□ -0.41
PABPC1-208ENST00000519004 SLC6A16Q9GZN6 736 aa12.5□□□□□ -0.41
PABPC1-208ENST00000519004 MIEF1Q9NQG6 463 aa12.5□□□□□ -0.41
PABPC1-208ENST00000519004 A0A1B0GTI1 187 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 CPED1A4D0V7 1026 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 CDHR4A6H8M9 788 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 F2P00734 622 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 CDK2P24941 298 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 SRSF4Q08170 494 aaKnown RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TWF1Q12792 350 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 MRPL58Q14197 206 aaKnown RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 SYPL1Q16563 259 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 IER5LQ5T953 404 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 MEPCEQ7L2J0 689 aaKnown RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 DPPA2Q7Z7J5 298 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 GID4Q8IVV7 300 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 STEAP2Q8NFT2 490 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 BBS10Q8TAM1 723 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 NUBPLQ8TB37 319 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 SYNPRQ8TBG9 265 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 GPBAR1Q8TDU6 330 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 RNF141Q8WVD5 230 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 XAGE5Q8WWM1 108 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TFGQ92734 400 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 MYNNQ9NPC7 610 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TAAR2Q9P1P5 351 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TP53TG5Q9Y2B4 290 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 CBY1Q9Y3M2 126 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 SAP18O00422 153 aaKnown RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 ARL6IP5O75915 188 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TACR2P21452 398 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 IFNGR2P38484 337 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TAS2R20P59543 309 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 ZNF85Q03923 595 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 LRRC37A5PQ49AS3 106 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 LBHQ53QV2 105 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-208ENST00000519004 LYPLAL1Q5VWZ2 237 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 SPRYD7Q5W111 196 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 C11orf96Q7Z7L8 435 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 OR10R2Q8NGX6 335 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 ISOC2Q96AB3 205 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 PIGQQ9BRB3 760 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 HCAR1Q9BXC0 346 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 TEX12Q9BXU0 123 aa12.49□□□□□ -0.41
PABPC1-208ENST00000519004 A0A087X0M5 115 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 A0A1B0GX30 115 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 MBTPS2O43462 519 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 FAM157CP0CG43 387 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 PDHA2P29803 388 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 FAUP35544 74 aaKnown RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 CLDN12P56749 244 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 OR2B8PP59922 312 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 ACY1Q03154 408 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 PCGF3Q3KNV8 242 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 KRBOX4Q5JUW0 171 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 PRSS55Q6UWB4 352 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 ANGPTL5Q86XS5 388 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 OR51S1Q8NGJ8 323 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 PPTC7Q8NI37 304 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 MOGAT1Q96PD6 335 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 MRPL37Q9BZE1 423 aaKnown RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 NRIP3Q9NQ35 241 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 RPS10P5Q9NQ39 176 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 INPP5EQ9NRR6 644 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 CACFD1Q9UGQ2 172 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 SCML2Q9UQR0 700 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 IFITM5A6NNB3 132 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 F8VVB4 439 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 F8VWA3 439 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 NARSO43776 548 aaKnown RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 MMP10P09238 476 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 GLP1RP43220 463 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 RPS11P62280 158 aaKnown RBP eCLIP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 TAF13Q15543 124 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 OR7A5Q15622 319 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 VWA2Q5GFL6 755 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 PWWP2BQ6NUJ5 590 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 ZNF620Q6ZNG0 422 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 PIK3IP1Q96FE7 263 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 S100A16Q96FQ6 103 aaKnown RBP12.48□□□□□ -0.41
PABPC1-208ENST00000519004 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 OR14A2Q96R54 314 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 TUBA4BQ9H853 241 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 ICKQ9UPZ9 632 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
PABPC1-208ENST00000519004 C9JQL5 133 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms