RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ZNF225Q9UK10 706 aa2.02□□□□□ -2.09
SKP1-203ENST00000517625 ZNF646O15015 1829 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 ASTN1O14525 1302 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 IQANK1A0A1B0GTG1 560 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 NKX2-6A6NCS4 301 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 GJE1A6NN92 205 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 A8MXQ7 604 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 E9PBE3 544 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 KRTAP4-16G5E9R7 235 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 FAM189A1O60320 539 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 SNNO75324 88 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 DIRAS1O95057 198 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 STAMBPO95630 424 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 INSP01308 110 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 RBMY1CP0DJD4 496 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 ICAM2P13598 275 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 CRISP2P16562 243 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 TBPP20226 339 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 NPR2P20594 1047 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 GNA11P29992 359 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 DDOSTP39656 456 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 CTRLP40313 264 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 EPS15P42566 896 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 QARSP47897 775 aaKnown RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 DUSP3P51452 185 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 SH3BGRP55822 239 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 FGL1Q08830 312 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 IL24Q13007 206 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 GNMTQ14749 295 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 GPNMBQ14956 572 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 ATP6AP1Q15904 470 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 NRF1Q16656 503 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 ANKDD1AQ495B1 522 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 FILIP1LQ4L180 1135 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 BOLA3Q53S33 107 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 GALNT17Q6IS24 598 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 PGAP1Q75T13 922 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 COX15Q7KZN9 410 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 KRTAP11-1Q8IUC1 163 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 CCDC65Q8IXS2 484 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 LRRC75A-AS1Q8N1F1 130 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 PNKDQ8N490 385 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 FAM133AQ8N9E0 248 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 IPMKQ8NFU5 416 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 OR4K14Q8NGD5 310 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 OR10G9Q8NGN4 311 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 UFD1Q92890 307 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 RNF2Q99496 336 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 SDHCQ99643 169 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 RIOK1Q9BRS2 568 aaKnown RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 TMEM43Q9BTV4 400 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 SLC25A39Q9BZJ4 359 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 NIPAL2Q9H841 368 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 YY1AP1Q9H869 796 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 BFARQ9NZS9 450 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 MTRF1LQ9UGC7 380 aaKnown RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 CDH9Q9ULB4 789 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 COL16A1Q07092 1604 aaPredicted RBP2.01□□□□□ -2.09
SKP1-203ENST00000517625 MEGF6O75095 1541 aa2.01□□□□□ -2.09
SKP1-203ENST00000517625 THSD7BQ9C0I4 1608 aa2□□□□□ -2.09
SKP1-203ENST00000517625 IGKV1D-8A0A087WSZ0 117 aa2□□□□□ -2.09
SKP1-203ENST00000517625 A6NIZ1 184 aa2□□□□□ -2.09
SKP1-203ENST00000517625 GOLGA8SH3BPF8 625 aa2□□□□□ -2.09
SKP1-203ENST00000517625 RGS16O15492 202 aaPredicted RBP2□□□□□ -2.09
SKP1-203ENST00000517625 CA11O75493 328 aa2□□□□□ -2.09
SKP1-203ENST00000517625 ATP5LO75964 103 aa2□□□□□ -2.09
SKP1-203ENST00000517625 KLF8O95600 359 aaPredicted RBP2□□□□□ -2.09
SKP1-203ENST00000517625 CALRP27797 417 aaKnown RBP2□□□□□ -2.09
SKP1-203ENST00000517625 CCR1P32246 355 aa2□□□□□ -2.09
SKP1-203ENST00000517625 NUDT1P36639 197 aa2□□□□□ -2.09
SKP1-203ENST00000517625 OPRD1P41143 372 aa2□□□□□ -2.09
SKP1-203ENST00000517625 HNMTP50135 292 aa2□□□□□ -2.09
SKP1-203ENST00000517625 RAP1BP61224 184 aa2□□□□□ -2.09
SKP1-203ENST00000517625 CHIT1Q13231 466 aa2□□□□□ -2.09
SKP1-203ENST00000517625 OXA1LQ15070 435 aa2□□□□□ -2.09
SKP1-203ENST00000517625 CYTH1Q15438 398 aa2□□□□□ -2.09
SKP1-203ENST00000517625 CARD16Q5EG05 197 aa2□□□□□ -2.09
SKP1-203ENST00000517625 OR2G6Q5TZ20 316 aa2□□□□□ -2.09
SKP1-203ENST00000517625 OR4F3Q6IEY1 312 aa2□□□□□ -2.09
SKP1-203ENST00000517625 C6orf89Q6UWU4 347 aa2□□□□□ -2.09
SKP1-203ENST00000517625 ZNF571Q7Z3V5 609 aaPredicted RBP2□□□□□ -2.09
SKP1-203ENST00000517625 CAMK2N1Q7Z7J9 78 aa2□□□□□ -2.09
SKP1-203ENST00000517625 C6orf223Q8N319 242 aa2□□□□□ -2.09
SKP1-203ENST00000517625 ACOT11Q8WXI4 607 aaPredicted RBP2□□□□□ -2.09
SKP1-203ENST00000517625 CXorf40BQ96DE9 158 aa2□□□□□ -2.09
SKP1-203ENST00000517625 ITCHQ96J02 903 aa2□□□□□ -2.09
SKP1-203ENST00000517625 KCNA7Q96RP8 456 aa2□□□□□ -2.09
SKP1-203ENST00000517625 COPS8Q99627 209 aa2□□□□□ -2.09
SKP1-203ENST00000517625 CCT7Q99832 543 aa2□□□□□ -2.09
SKP1-203ENST00000517625 CAPS2Q9BXY5 557 aa2□□□□□ -2.09
SKP1-203ENST00000517625 ROGDIQ9GZN7 287 aa2□□□□□ -2.09
SKP1-203ENST00000517625 AZI2Q9H6S1 392 aa2□□□□□ -2.09
SKP1-203ENST00000517625 GORASP2Q9H8Y8 452 aa2□□□□□ -2.09
SKP1-203ENST00000517625 LRRC40Q9H9A6 602 aa2□□□□□ -2.09
SKP1-203ENST00000517625 MCCC2Q9HCC0 563 aa2□□□□□ -2.09
SKP1-203ENST00000517625 RAB18Q9NP72 206 aa2□□□□□ -2.09
SKP1-203ENST00000517625 STAP1Q9ULZ2 295 aa2□□□□□ -2.09
SKP1-203ENST00000517625 MEMO1Q9Y316 297 aa2□□□□□ -2.09
SKP1-203ENST00000517625 FAM240BA0A1B0GVZ2 78 aa1.99□□□□□ -2.09
SKP1-203ENST00000517625 A0A1W2PNU3 283 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms